CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027826_P001	Maize	cytosol	80.78	99.36
Os03t0167700-01	Rice	cytosol	80.0	98.09
TraesCS4D01G282100.1	Wheat	cytosol	79.22	97.44
TraesCS4B01G283300.2	Wheat	cytosol	79.22	97.44
EER94259	Sorghum	cytosol	77.66	94.92
GSMUA_Achr9P11070_001	Banana	cytosol	70.65	93.15
KXG37326	Sorghum	cytosol	74.03	92.83
Zm00001d048336_P003	Maize	cytosol	80.78	91.74
VIT_06s0004g00830.t01	Wine grape	cytosol	73.77	90.45
PGSC0003DMT400079934	Potato	cytosol	73.25	90.38
Solyc01g073650.2.1	Tomato	cytosol	73.25	90.38
GSMUA_Achr2P12450_001	Banana	cytosol	73.51	90.13
PGSC0003DMT400081973	Potato	cytosol	73.25	90.1
Solyc01g005950.2.1	Tomato	cytosol, extracellular	73.25	90.1
KRH58904	Soybean	cytosol	72.73	90.03
KRH42814	Soybean	cytosol	72.73	90.03
GSMUA_Achr4P28610_001	Banana	cytosol	73.25	89.81
AT3G58500.1	Thale cress	cytosol	72.73	89.46
AT2G42500.1	Thale cress	cytosol	72.73	89.46
CDY55398	Canola	cytosol	72.47	89.14
CDY51518	Canola	cytosol	72.47	89.14
CDY14840	Canola	cytosol	72.47	89.14
Solyc01g034020.2.1	Tomato	cytosol	70.65	88.89
CDY00569	Canola	cytosol	72.21	88.82
KRG96343	Soybean	cytosol	72.21	88.82
Bra003340.1-P	Field mustard	cytosol	71.69	88.75
CDY06035	Canola	cytosol	71.95	88.5
Bra007398.1-P	Field mustard	cytosol	71.95	88.5
Bra014569.1-P	Field mustard	cytosol	71.95	88.5
Bra016870.1-P	Field mustard	cytosol	71.95	88.5
CDX71949	Canola	cytosol	71.95	88.5
CDX88988	Canola	cytosol	71.95	88.5
KRH68078	Soybean	cytosol	71.95	88.5
CDY47976	Canola	cytosol	71.95	88.5
TraesCS4A01G020400.1	Wheat	cytosol	73.77	88.47
CDY69521	Canola	cytosol	71.69	88.18
CDX98300	Canola	cytosol	71.69	88.18
CDY66916	Canola	cytosol	71.43	87.86
KRH38026	Soybean	cytosol	70.91	86.94
KRH71796	Soybean	cytosol	70.91	86.94
CDX67746	Canola	cytosol	45.71	86.7
GSMUA_Achr4P22190_001	Banana	cytosol	54.55	82.35
GSMUA_Achr8P15360_001	Banana	cytosol	68.83	82.3
HORVU4Hr1G074680.4	Barley	cytosol, plastid	85.71	80.49
EES06511	Sorghum	cytosol	62.6	78.76
EER88560	Sorghum	cytosol	62.34	78.43
Bra000262.1-P	Field mustard	cytosol	67.01	78.42
Bra004705.1-P	Field mustard	cytosol	68.31	78.04
VIT_13s0156g00060.t01	Wine grape	cytosol	73.77	71.36
EER98649	Sorghum	cytosol	52.47	65.8
EES01303	Sorghum	cytosol	43.64	55.45
EES13960	Sorghum	cytosol	34.29	43.28
EER95117	Sorghum	cytosol	34.81	41.61
EES02921	Sorghum	cytosol	34.81	41.23
EER89259	Sorghum	cytosol	32.99	39.2
EER90463	Sorghum	cytosol	34.03	37.54
KXG31386	Sorghum	cytosol	34.55	36.24
OQU77459	Sorghum	cytosol	35.32	28.63

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:13.4.1.2.3	MapMan:18.4.24.1.2.5	Gene3D:3.60.21.10	UniProt:C5WWS9
InterPro:Calcineurin-like_PHP_ApaH	EnsemblPlants:EER95434	ProteinID:EER95434	ProteinID:EER95434.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004842	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0006470	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009966	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0016787	GO:GO:0019538
InterPro:IPR029052	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PIRSF:PIRSF033096	PRINTS:PR00114	ScanProsite:PS00125
PANTHER:PTHR11668	PANTHER:PTHR11668:SF265	SMART:SM00156	EnsemblPlantsGene:SORBI_3001G492300	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase
UniParc:UPI00081AE582	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:76173903..76179572

Molecular Weight (calculated)

43318.5 Da

IEP (calculated)

5.149

GRAVY (calculated)

-0.348

Length

385 amino acids

Sequence
(BLAST)

001: MCGAGRPTWQ AAFPTNLSRL SLGSAPLPDF LPHSVSLTPR ARARSPSLPP RLAAGDELEL ELVPRIEDGH RGMEPMNVDN GGCGGLDAQI EQLMQCRPLA
101: EQEVKALCEK AKEILMEESN VQPVKSPVTI CGDIHGQFHD LVELFRIGGK CPDTNYLFMG DYVDRGYYSV ETVTLLVALK VRYPHRITIL RGNHESRQIT
201: QVYGFYDECL RKYGNANVWK TFTDLFDYFP LTALVESEIF CLHGGLSPSI ENLDSVRSLD RVQEVPHEGP MCDLLWSDPD DRCGWGISPR GAGYTFGQDI
301: SEQFNHTNNL KLVARAHQLV MEGYNWAHEQ KVVTIFSAPN YCYRCGNMAS ILEVDDCNSH TFIQFEPAPR RGEPDVTRRT PDYFL

Best Arabidopsis Sequence Match ( AT3G58500.1 )
(BLAST)

001: MGANSLPTDA TLDLDEQISQ LMQCKPLSEQ QVRALCEKAK EILMDESNVQ PVKSPVTICG DIHGQFHDLA ELFRIGGKCP DTNYLFMGDY VDRGYYSVET
101: VTLLVGLKVR YPQRITILRG NHESRQITQV YGFYDECLRK YGNANVWKIF TDLFDYFPLT ALVESEIFCL HGGLSPSIET LDNIRNFDRV QEVPHEGPMC
201: DLLWSDPDDR CGWGISPRGA GYTFGQDISE QFNHTNNLKL IARAHQLVMD GFNWAHEQKV VTIFSAPNYC YRCGNMASIL EVDDCRNHTF IQFEPAPRRG
301: EPDVTRRTPD YFL

Arabidopsis Description

PP2A4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VCH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.