CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032076_P002	Maize	cytosol	97.38	97.7
Os08t0455600-01	Rice	cytosol, plasma membrane	91.15	90.55
TraesCS6A01G404700.1	Wheat	cytosol	90.16	90.46
TraesCS6D01G388000.1	Wheat	cytosol	89.84	90.13
TraesCS6B01G449000.1	Wheat	cytosol	89.84	90.13
GSMUA_Achr4P09690_001	Banana	cytosol	84.59	83.77
GSMUA_Achr8P24570_001	Banana	cytosol	83.61	83.33
VIT_08s0056g00220.t01	Wine grape	cytosol	80.0	82.15
KRH51761	Soybean	cytosol, nucleus	79.34	80.13
EER95117	Sorghum	cytosol	78.36	74.22
HORVU6Hr1G092760.2	Barley	cytosol	74.1	72.2
EER89259	Sorghum	cytosol	75.41	70.99
EES02921	Sorghum	cytosol	70.49	66.15
KXG31386	Sorghum	cytosol	75.08	62.4
EER90463	Sorghum	cytosol	67.87	59.31
OQU77459	Sorghum	cytosol	70.49	45.26
KXG37326	Sorghum	cytosol	43.93	43.65
EER98649	Sorghum	cytosol	43.61	43.32
EER88560	Sorghum	cytosol	43.28	43.14
EES06511	Sorghum	cytosol	42.95	42.81
EER94259	Sorghum	cytosol	43.28	41.9
EES01303	Sorghum	cytosol	38.03	38.28
EER95434	Sorghum	plastid	43.28	34.29

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	EntrezGene:8078397	UniProt:C5YLT7
InterPro:Calcineurin-like_PHP_ApaH	EnsemblPlants:EES13960	ProteinID:EES13960	ProteinID:EES13960.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052	InterPro:Metallo-depent_PP-like
PFAM:PF00149	PFAM:PF16891	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF294
SMART:SM00156	EnsemblPlantsGene:SORBI_3007G148600	SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI0001A87A4E
RefSeq:XP_002444465.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:57953768..57955526

Molecular Weight (calculated)

34563.3 Da

IEP (calculated)

4.966

GRAVY (calculated)

-0.202

Length

305 amino acids

Sequence
(BLAST)

001: MDGGTVEDLI RRLLDGKKHK VTGKKAVQLT EPEIRHLCVT AKEVFLSQPN LLELEAPINV CGDIHGQFSD LLRLFEYGGL PPTANYLFLG DYVDRGKQSI
101: ETICLLLAYK IRYPDNFFLL RGNHECASIN RIYGFYDECK RRFSVRLWKL FTDCFNCLPV AAVIDDKILC MHGGLSPDLD NLNRIREIQR PVDVPDQGLL
201: CDLLWSDPDR DSSGWGDNDR GVSFTFGADK VTEFLNKQDL DLVCRAHQVV EDGYEFFADR QLVTIFSAPN YCGEFNNAGA LMNVDASLLC SFQILKPYRG
301: KAQTE

Best Arabidopsis Sequence Match ( AT1G64040.1 )
(BLAST)

001: MEDSVVDDVI KRLLGAKNGK TTKQVQLTEA EIKHLCSTAK QIFLTQPNLL ELEAPIKICG DTHGQFSDLL RLFEYGGYPP AANYLFLGDY VDRGKQSVET
101: ICLLLAYKIK YKENFFLLRG NHECASINRI YGFYDECKKR YSVRVWKIFT DCFNCLPVAA LIDEKILCMH GGLSPELKHL DEIRNIPRPA DIPDHGLLCD
201: LLWSDPDKDI EGWGENDRGV SYTFGADKVE EFLQTHDLDL ICRAHQVVED GYEFFANRQL VTIFSAPNYC GEFDNAGAMM SVDDSLTCSF QILKASEKKG
301: NFGFGKNAGR RGTPPRKGGG KG

Arabidopsis Description

TOPP3Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178WMA0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.