CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036285_P001	Maize	cytosol, extracellular	96.3	96.3
Zm00001d045213_P004	Maize	cytosol	95.68	95.68
Os06t0164100-02	Rice	cytosol, nucleus, plasma membrane	89.2	89.75
TraesCS7D01G124400.1	Wheat	cytosol	87.96	88.78
TraesCS7B01G025800.1	Wheat	cytosol	87.96	88.78
TraesCS7A01G126500.1	Wheat	cytosol	87.96	88.78
HORVU7Hr1G026400.1	Barley	cytosol	87.35	88.16
GSMUA_Achr2P15380_001	Banana	cytosol	81.17	82.45
VIT_02s0025g00480.t01	Wine grape	cytosol	80.25	81.5
GSMUA_Achr10P...	Banana	cytosol	79.94	80.94
KRH59977	Soybean	nucleus	79.63	80.37
KRH41246	Soybean	nucleus	79.32	80.06
AT4G11240.1	Thale cress	cytosol	78.4	78.88
AT1G64040.1	Thale cress	cytosol	77.78	78.26
CDY34395	Canola	cytosol	77.47	78.19
Bra027677.1-P	Field mustard	cytosol	77.47	78.19
CDY25556	Canola	cytosol	77.47	78.19
CDY13242	Canola	cytosol	76.85	77.81
Bra035240.1-P	Field mustard	cytosol	76.54	77.5
CDX86799	Canola	cytosol	76.54	77.5
CDX90793	Canola	cytosol	76.85	77.33
Bra000740.1-P	Field mustard	cytosol	76.54	77.26
CDY05136	Canola	cytosol	76.54	77.02
EES13960	Sorghum	cytosol	70.99	75.41
EER95117	Sorghum	cytosol	74.38	74.84
GSMUA_Achr7P10840_001	Banana	cytosol	71.3	72.19
EES02921	Sorghum	cytosol	67.59	67.38
KXG31386	Sorghum	cytosol	72.84	64.31
GSMUA_Achr4P31160_001	Banana	cytosol	82.41	61.66
EER90463	Sorghum	cytosol	65.74	61.03
OQU77459	Sorghum	cytosol	67.28	45.89
KXG37326	Sorghum	cytosol	40.43	42.67
EER88560	Sorghum	cytosol	40.12	42.48
EER98649	Sorghum	cytosol	40.12	42.35
EES06511	Sorghum	cytosol	39.81	42.16
EER94259	Sorghum	cytosol	39.2	40.32
EES01303	Sorghum	cytosol	33.33	35.64
EER95434	Sorghum	plastid	39.2	32.99

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	EntrezGene:8076142	UniProt:C5Z4V4
InterPro:Calcineurin-like_PHP_ApaH	EnsemblPlants:EER89259	ProteinID:EER89259	ProteinID:EER89259.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052	InterPro:Metallo-depent_PP-like
PFAM:PF00149	PFAM:PF16891	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF294
SMART:SM00156	EnsemblPlantsGene:SORBI_3010G051500	SUPFAM:SSF56300	InterPro:STPPase_N	unigene:Sbi.8607	InterPro:Ser/Thr-sp_prot-phosphatase
UniParc:UPI0001A89635	RefSeq:XP_002437892.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:4006575..4011539

Molecular Weight (calculated)

36639.0 Da

IEP (calculated)

5.130

GRAVY (calculated)

-0.216

Length

324 amino acids

Sequence
(BLAST)

001: MDEAAVDDLI RRLLEARGGR TPRNAQVTDA DIRRLCAAAK DVFLQQPNLL ELEAPIKICG DVHGQYSDLL RLFEYGGYPP DANYLFLGDY VDRGKQSIET
101: ICLLLAYKLK YPENFFLLRG NHECASINRI YGFFDECKRR FNVRIWKIFT ECFNCLPVAA LIDDKIFCMH GGLSPELKNM DQIRNISRPV DVPDVGLLCD
201: LLWSDPEKEL DGWGENDRGV SYTFGADIVA EFLQKHDLDL ICRAHQVVED GYEFFANRQL VTIFSAPNYC GEFDNAGALM SIDDSLVCSF QILKPSEKKG
301: KAGTSNMSKP GTPPRKIKIS VTRI

Best Arabidopsis Sequence Match ( AT1G64040.1 )
(BLAST)

001: MEDSVVDDVI KRLLGAKNGK TTKQVQLTEA EIKHLCSTAK QIFLTQPNLL ELEAPIKICG DTHGQFSDLL RLFEYGGYPP AANYLFLGDY VDRGKQSVET
101: ICLLLAYKIK YKENFFLLRG NHECASINRI YGFYDECKKR YSVRVWKIFT DCFNCLPVAA LIDEKILCMH GGLSPELKHL DEIRNIPRPA DIPDHGLLCD
201: LLWSDPDKDI EGWGENDRGV SYTFGADKVE EFLQTHDLDL ICRAHQVVED GYEFFANRQL VTIFSAPNYC GEFDNAGAMM SVDDSLTCSF QILKASEKKG
301: NFGFGKNAGR RGTPPRKGGG KG

Arabidopsis Description

TOPP3Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178WMA0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.