Factsheet for Bra035240.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra008837.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G11240.1	Bra008837.1-P	AT5G13310.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86799	Canola	cytosol	100.0	100.0
Bra000740.1-P	Field mustard	cytosol	92.5	92.21
AT4G11240.1	Thale cress	cytosol	90.31	89.75
KRH41246	Soybean	nucleus	85.94	85.67
KRH59977	Soybean	nucleus	85.62	85.36
VIT_02s0025g00480.t01	Wine grape	cytosol	85.0	85.27
GSMUA_Achr2P15380_001	Banana	cytosol	83.12	83.39
GSMUA_Achr10P...	Banana	cytosol	80.94	80.94
Bra027677.1-P	Field mustard	cytosol	80.94	80.69
HORVU7Hr1G026400.1	Barley	cytosol	80.0	79.75
Os06t0164100-02	Rice	cytosol, nucleus, plasma membrane	80.0	79.5
TraesCS7D01G124400.1	Wheat	cytosol	79.69	79.44
TraesCS7B01G025800.1	Wheat	cytosol	79.69	79.44
TraesCS7A01G126500.1	Wheat	cytosol	79.69	79.44
Zm00001d045213_P004	Maize	cytosol	78.12	77.16
Bra020335.1-P	Field mustard	cytosol	75.0	76.92
Zm00001d036285_P001	Maize	cytosol, extracellular	77.81	76.85
EER89259	Sorghum	cytosol	77.5	76.54
Bra002590.1-P	Field mustard	cytosol	74.38	76.53
Bra018397.1-P	Field mustard	cytosol	72.81	76.39
Bra006731.1-P	Field mustard	cytosol	73.44	76.05
Bra005009.1-P	Field mustard	cytosol	67.5	74.48
Bra018191.1-P	Field mustard	cytosol	71.88	74.19
Bra000475.1-P	Field mustard	cytosol	73.12	73.58
GSMUA_Achr7P10840_001	Banana	cytosol	72.81	72.81
Bra033678.1-P	Field mustard	cytosol	70.94	70.28
Bra009941.1-P	Field mustard	cytosol	68.75	68.97
Bra040535.1-P	Field mustard	cytosol	68.44	68.87
Bra039424.1-P	Field mustard	cytosol	69.06	68.85
Bra001155.1-P	Field mustard	cytosol	68.12	68.55
Bra020573.1-P	Field mustard	cytosol	68.12	63.37
GSMUA_Achr4P31160_001	Banana	cytosol	81.56	60.28
Bra000153.1-P	Field mustard	cytosol	75.31	49.18
Bra016247.1-P	Field mustard	cytosol	42.19	44.12
Bra016870.1-P	Field mustard	cytosol	42.5	43.45
Bra031712.1-P	Field mustard	cytosol	41.25	43.14
Bra027833.1-P	Field mustard	cytosol	41.25	43.14
Bra019934.1-P	Field mustard	cytosol	41.25	43.14
Bra014569.1-P	Field mustard	cytosol	41.88	42.81
Bra007398.1-P	Field mustard	cytosol	41.88	42.81
Bra003340.1-P	Field mustard	cytosol	41.56	42.77
Bra019089.1-P	Field mustard	cytosol	40.62	42.62
Bra000262.1-P	Field mustard	cytosol	42.5	41.34
Bra038247.1-P	Field mustard	cytosol	38.44	40.59
Bra004705.1-P	Field mustard	cytosol	42.5	40.36
Bra001770.1-P	Field mustard	cytosol	38.12	40.26
Bra027930.1-P	Field mustard	cytosol	22.81	39.04
Bra035830.1-P	Field mustard	cytosol	38.44	36.5
Bra014246.1-P	Field mustard	cytosol	38.75	35.73
Bra026408.1-P	Field mustard	cytosol	40.94	10.65

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	EnsemblPlantsGene:Bra035240	EnsemblPlants:Bra035240.1
EnsemblPlants:Bra035240.1-P	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052	UniProt:M4F2E2	InterPro:Metallo-depent_PP-like	PFAM:PF00149
PFAM:PF16891	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF294	SMART:SM00156
SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI0002546B17	SEG:seg	:

Description

AT4G11240 (E=2e-158) TOPP7 | TOPP7; protein serine/threonine phosphatase

Coordinates

chrA08:-:9457992..9459370

Molecular Weight (calculated)

36178.3 Da

IEP (calculated)

5.670

GRAVY (calculated)

-0.296

Length

320 amino acids

Sequence
(BLAST)

001: MDENLLDDII RRLLETNNGK QVKLLEAEIR QLCSASKEVF LSQPNLLELE APIKICGDVH GQFPDLLRLF EYGGYPPAAN YLFLGDYVDR GKQSIETICL
101: LLAYKLKYKL NFFLLRGNHE CASINRVYGF YDECKRRYNV RLWKSFTDCF NCLPVAALID DKILCMHGGL SPDLKTLDDI RRIPRPVDVP DQGVLCDLLW
201: ADPDKDIQGW GENDRGVSFT FGPDKVAEFL QTHDLDLVCR AHQVVEDGYE FFAKRQLVTI FSAPNYCGEF DNAGAMMSVD DSLTCSFQIL KSTEKKGGRF
301: GYSNNVHRPG TPPHKGGKGG

Best Arabidopsis Sequence Match ( AT4G11240.1 )
(BLAST)

001: MDETLLDDII RRLLATNNGR TVKQAQITET EIRQLCLASK EVFLSQPNLL ELEAPIKICG DVHGQFPDLL RLFEYGGYPP AANYLFLGDY VDRGKQSIET
101: ICLLLAYKVK YKFNFFLLRG NHECASINRV YGFYDECKRR YNVRLWKTFT ECFNCLPVSA LIDDKILCMH GGLSPDIKSL DDIRRIPRPI DVPDQGILCD
201: LLWADPDREI QGWGENDRGV SYTFGADKVA EFLQTHDLDL ICRAHQVVED GYEFFAKRQL VTIFSAPNYC GEFDNAGALM SVDDSLTCSF QILKASEKKG
301: RFGFNNNVPR PGTPPHKGGK GR

Arabidopsis Description

TOPP6Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178V1Q1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.