Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69649 | Canola | nucleus, plastid | 87.56 | 94.41 |
| CDY09785 | Canola | nucleus, plastid | 78.24 | 90.96 |
| CDX81375 | Canola | nucleus, plastid | 11.66 | 70.31 |
| AT5G13310.1 | Thale cress | nucleus, plastid | 65.54 | 68.38 |
| CDX81376 | Canola | cytosol | 15.29 | 67.82 |
| CDX81207 | Canola | nucleus, plastid | 21.5 | 67.48 |
| CDY24187 | Canola | cytosol | 13.73 | 65.43 |
| CDX69038 | Canola | plastid | 26.17 | 49.03 |
| CDY31896 | Canola | nucleus | 20.47 | 47.02 |
| CDY18334 | Canola | cytosol | 21.24 | 44.57 |
| CDX72207 | Canola | cytosol, mitochondrion, nucleus | 9.59 | 39.36 |
Protein Annotations
Description
AT5G13310 (E=6e-076) | unknown protein
Coordinates
chrA10:-:14048689..14050316
Molecular Weight (calculated)
43016.6 Da
IEP (calculated)
4.397
GRAVY (calculated)
-1.151
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGEDFQSRV EKIFGSLAFS RSTSSTTTST SSAAPLRQTQ SGSVWSLSGA EVEKREWKRE QLASYDREEM PCASSFDEIL RQQRISSTDR KEGEEGGDEE
101: FDGDDDDWSI RASMGLDRTL DDEDEEDEYD KVALGKEDVG KGVSMEDVIS RPCGMRIRDP RANHAAAKIR LKEDELEANK SSPSGFIPSK SKEPTPHPEE
201: SSKSVPPKPI LKRKENSSDS EARTSKRVRF DVSEETSKEP EDNYSVAASL KSALPRSRSG AQVPDYLINP SKYTCYSFDP SSELNEKSQT QEYTDIPKDS
301: EGLETSESES FKKVSFVPQK KTKDVREDGS NCSETKTVDA GRVAEDERPS ETEGGDTEIG ESESCNRFQS NDRQYRAKQS VDETDV
101: FDGDDDDWSI RASMGLDRTL DDEDEEDEYD KVALGKEDVG KGVSMEDVIS RPCGMRIRDP RANHAAAKIR LKEDELEANK SSPSGFIPSK SKEPTPHPEE
201: SSKSVPPKPI LKRKENSSDS EARTSKRVRF DVSEETSKEP EDNYSVAASL KSALPRSRSG AQVPDYLINP SKYTCYSFDP SSELNEKSQT QEYTDIPKDS
301: EGLETSESES FKKVSFVPQK KTKDVREDGS NCSETKTVDA GRVAEDERPS ETEGGDTEIG ESESCNRFQS NDRQYRAKQS VDETDV
001: MASSGSADED FQSRVAKIFG SLPFSRPSSS KFSTSSSAPA SRQQSGSVWT LSDTEVEKRE WKRDSYDRDE IPCASSFDEL LKQQKPSEDD LKDIDCGEDF
101: DGVWSIRASM GLDRTLDDEA EEDEYDKVAL GEENDGEGCG RIRDPRANYV AARIRLKEDE IEANKFNTSA SQPSESKEPH AEESSEAMPR KPILKRKENS
201: SDSEARTSKR VRFDSVPEET LKKPEDTCSA SASSKIVSHQ GKSGARVPDY LLNPSSYTRY SFDPSCELDV ESPTGEYMDT PNAVEGLKNP ESESFPKVSF
301: IPQNKTKDVS EDSSNCNETK PIVAGELAEE ERPSATEDGD TEIRESESCT SFQSKGRQYR AKLSLDETDV
101: DGVWSIRASM GLDRTLDDEA EEDEYDKVAL GEENDGEGCG RIRDPRANYV AARIRLKEDE IEANKFNTSA SQPSESKEPH AEESSEAMPR KPILKRKENS
201: SDSEARTSKR VRFDSVPEET LKKPEDTCSA SASSKIVSHQ GKSGARVPDY LLNPSSYTRY SFDPSCELDV ESPTGEYMDT PNAVEGLKNP ESESFPKVSF
301: IPQNKTKDVS EDSSNCNETK PIVAGELAEE ERPSATEDGD TEIRESESCT SFQSKGRQYR AKLSLDETDV
Arabidopsis Description
Uncharacterized protein At5g13310 [Source:UniProtKB/TrEMBL;Acc:Q9LYU5]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.