Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69649 | Canola | nucleus, plastid | 64.59 | 66.76 |
| Bra008837.1-P | Field mustard | nucleus, plastid | 68.38 | 65.54 |
| CDY09785 | Canola | nucleus, plastid | 58.38 | 65.06 |
| CDX81375 | Canola | nucleus, plastid | 10.0 | 57.81 |
| CDX81207 | Canola | nucleus, plastid | 16.76 | 50.41 |
| CDX81376 | Canola | cytosol | 11.62 | 49.43 |
| CDY24187 | Canola | cytosol | 9.73 | 44.44 |
| CDX69038 | Canola | plastid | 19.73 | 35.44 |
| CDY18334 | Canola | cytosol | 16.49 | 33.15 |
| CDY31896 | Canola | nucleus | 14.86 | 32.74 |
| CDX72207 | Canola | cytosol, mitochondrion, nucleus | 6.76 | 26.6 |
Protein Annotations
| MapMan:35.2 | EntrezGene:831172 | UniProt:A0A178UPF2 | ProteinID:AED91879.1 | ProteinID:ANM69987.1 | ArrayExpress:AT5G13310 |
| EnsemblPlantsGene:AT5G13310 | RefSeq:AT5G13310 | TAIR:AT5G13310 | RefSeq:AT5G13310-TAIR-G | EnsemblPlants:AT5G13310.1 | TAIR:AT5G13310.1 |
| EMBL:AY087617 | EMBL:BT003951 | EMBL:BT005046 | ProteinID:CAB86638.1 | GO:GO:0008150 | RefSeq:NP_001331631.1 |
| RefSeq:NP_196835.1 | ProteinID:OAO95217.1 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001017 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR13445 |
| UniProt:Q9LYU5 | UniParc:UPI000000C1FD | SEG:seg | : | : | : |
Description
Uncharacterized protein At5g13310 [Source:UniProtKB/TrEMBL;Acc:Q9LYU5]
Coordinates
chr5:+:4263482..4265860
Molecular Weight (calculated)
41058.3 Da
IEP (calculated)
4.306
GRAVY (calculated)
-1.041
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSGSADED FQSRVAKIFG SLPFSRPSSS KFSTSSSAPA SRQQSGSVWT LSDTEVEKRE WKRDSYDRDE IPCASSFDEL LKQQKPSEDD LKDIDCGEDF
101: DGVWSIRASM GLDRTLDDEA EEDEYDKVAL GEENDGEGCG RIRDPRANYV AARIRLKEDE IEANKFNTSA SQPSESKEPH AEESSEAMPR KPILKRKENS
201: SDSEARTSKR VRFDSVPEET LKKPEDTCSA SASSKIVSHQ GKSGARVPDY LLNPSSYTRY SFDPSCELDV ESPTGEYMDT PNAVEGLKNP ESESFPKVSF
301: IPQNKTKDVS EDSSNCNETK PIVAGELAEE ERPSATEDGD TEIRESESCT SFQSKGRQYR AKLSLDETDV
101: DGVWSIRASM GLDRTLDDEA EEDEYDKVAL GEENDGEGCG RIRDPRANYV AARIRLKEDE IEANKFNTSA SQPSESKEPH AEESSEAMPR KPILKRKENS
201: SDSEARTSKR VRFDSVPEET LKKPEDTCSA SASSKIVSHQ GKSGARVPDY LLNPSSYTRY SFDPSCELDV ESPTGEYMDT PNAVEGLKNP ESESFPKVSF
301: IPQNKTKDVS EDSSNCNETK PIVAGELAEE ERPSATEDGD TEIRESESCT SFQSKGRQYR AKLSLDETDV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.