Factsheet for Bra026408.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89309	Canola	cytosol	24.8	100.0
CDX94291	Canola	cytosol	24.8	100.0
AT4G26720.1	Thale cress	cytosol	24.07	97.05
Bra019089.1-P	Field mustard	cytosol	24.07	97.05
VIT_19s0090g01290.t01	Wine grape	cytosol	22.85	92.13
PGSC0003DMT400057148	Potato	cytosol	22.85	92.13
Solyc07g065020.2.1	Tomato	cytosol	22.76	91.8
KRH14305	Soybean	cytosol	22.76	90.91
EER98649	Sorghum	cytosol	22.68	90.88
KRH73826	Soybean	cytosol	22.68	90.58
Os09t0284200-01	Rice	cytosol, plasma membrane	22.6	90.55
GSMUA_Achr7P06210_001	Banana	cytosol	22.36	90.46
Zm00001d005110_P001	Maize	cytosol	18.21	90.32
TraesCS5A01G176800.1	Wheat	cytosol	22.52	90.23
TraesCS5D01G180100.1	Wheat	cytosol	22.52	90.23
GSMUA_Achr1P09340_001	Banana	cytosol	21.87	88.2
TraesCS5B01G173100.1	Wheat	cytosol	22.52	87.94
HORVU5Hr1G053560.4	Barley	cytosol	22.52	83.18
Bra016247.1-P	Field mustard	cytosol	16.1	64.71
Bra016870.1-P	Field mustard	cytosol	16.42	64.54
Bra007398.1-P	Field mustard	cytosol	16.26	63.9
Bra014569.1-P	Field mustard	cytosol	16.26	63.9
Bra019934.1-P	Field mustard	cytosol	15.85	63.73
Bra031712.1-P	Field mustard	cytosol	15.85	63.73
Bra003340.1-P	Field mustard	cytosol	16.1	63.67
Bra027833.1-P	Field mustard	cytosol	15.69	63.07
Bra038247.1-P	Field mustard	cytosol	14.72	59.74
Bra000262.1-P	Field mustard	cytosol	15.94	59.57
Bra001770.1-P	Field mustard	cytosol	14.55	59.08
Bra004705.1-P	Field mustard	cytosol	15.85	57.86
Bra027930.1-P	Field mustard	cytosol	8.78	57.75
Bra035830.1-P	Field mustard	cytosol	14.72	53.71
Bra014246.1-P	Field mustard	cytosol	14.63	51.87
Bra006731.1-P	Field mustard	cytosol	10.98	43.69
Bra020335.1-P	Field mustard	cytosol	10.98	43.27
Bra002590.1-P	Field mustard	cytosol	10.89	43.09
Bra018397.1-P	Field mustard	cytosol	10.65	42.95
Bra040535.1-P	Field mustard	cytosol	10.98	42.45
Bra009941.1-P	Field mustard	cytosol	10.98	42.32
Bra018191.1-P	Field mustard	cytosol	10.65	42.26
Bra000475.1-P	Field mustard	cytosol	10.89	42.14
Bra001155.1-P	Field mustard	cytosol	10.81	41.82
Bra039424.1-P	Field mustard	cytosol	10.81	41.43
Bra000740.1-P	Field mustard	cytosol	10.81	41.43
Bra005009.1-P	Field mustard	cytosol	9.76	41.38
Bra035240.1-P	Field mustard	cytosol	10.65	40.94
Bra033678.1-P	Field mustard	cytosol	10.73	40.87
Bra027677.1-P	Field mustard	cytosol	10.65	40.81
Bra020573.1-P	Field mustard	cytosol	10.81	38.66
Bra000153.1-P	Field mustard	cytosol	11.87	29.8

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:1.10.132.10	Gene3D:1.10.238.10	Gene3D:1.10.418.10	MapMan:18.4.24.1.3.1
MapMan:20.2.2.4	Gene3D:3.60.21.10	InterPro:Actinin_actin-bd_CS	EnsemblPlantsGene:Bra026408	EnsemblPlants:Bra026408.1	EnsemblPlants:Bra026408.1-P
InterPro:CH-domain	InterPro:CH_dom_sf	InterPro:Calcineurin-like_PHP_ApaH	ncoils:Coil	InterPro:DNA_brk_join_enz	InterPro:EF-hand-dom_pair
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003779	GO:GO:0003824	GO:GO:0003917
GO:GO:0004721	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005694	GO:GO:0006139	GO:GO:0006259	GO:GO:0006265	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0019538
InterPro:IPR001715	InterPro:IPR014727	InterPro:IPR029052	InterPro:IPR036872	UniProt:M4EC99	InterPro:Metallo-depent_PP-like
PFAM:PF00149	PFAM:PF00307	PFAM:PF01028	PFAM:PF14370	PRINTS:PR00114	ScanProsite:PS00020
ScanProsite:PS00125	ScanProsite:PS00176	PFscan:PS50021	PANTHER:PTHR19961	PANTHER:PTHR19961:SF37	SMART:SM00033
SMART:SM00156	SMART:SM00435	SUPFAM:SSF47473	SUPFAM:SSF47576	SUPFAM:SSF56300	SUPFAM:SSF56349
InterPro:Ser/Thr-sp_prot-phosphatase	InterPro:TopoI_AS	InterPro:TopoI_C_dom	InterPro:TopoI_cat_a/b-sub_euk	InterPro:TopoI_cat_euk	InterPro:TopoI_euk
UniParc:UPI000254556B	SEG:seg	:	:	:	:

Description

AT4G26700 (E=0.0) ATFIM1, FIM1 | ATFIM1; actin binding

Coordinates

chrA01:+:9487327..9510202

Molecular Weight (calculated)

139292.0 Da

IEP (calculated)

6.220

GRAVY (calculated)

-0.358

Length

1230 amino acids

Sequence
(BLAST)

0001: MFEHGSSDPY TTPRETQVNQ DIINLLIIPI TCEVSERKMT RFSSRLIMFS SSLSVHSPHR YRCHRSDEFN AECSFTRATK INPFNCSSEA YDDPFPGRFE
0101: KEDSIVIKYV FREMSGFVGV VVSDPWLQSQ FTQVELRTLN SKFVSLKNSS GNITVEDLPP LLSKFKAISA TFKEDEIKEI LQELASDTSS DVEFEEFLKI
0201: YLNLQGKAAE KSGGHSSSFL KASTTTLLHT INQSEKGSFV QHINRYLGDD PFLKQFLPLD PDSNQLYELV KDGVLLCKLI NVAVPGTIDE RAINTKRVLN
0301: PWERNENHTL CLNSAKAVGC TVVNIGTQDL AEGRPHLVLG LISQLIKIQL LADLNLKKTP QLVELLEDSD DVEELLRLPP EKVLLKWMNF HLKKGGYKKT
0401: VSNFSSDLKD AQAYAYLLNV LAPEHCDPAT LDAKDPLERA ELVLCHAERM NCKRYLTAEE IVEGSPNLNL AFVAQIFHER NGLSTDGKYS FAEMMTEDVQ
0501: TCRDERCYRL WINSLGIESY VNNVFEDVRN GWILLEVLDK ITPGSVNWKH ASKPPIKMPF RKVENCNQVV KIGKELNFSL VNVAGNDIVQ GNKKLILGLL
0601: WQLMRFHMLQ LLKSLRSRTR GKDMTDADIL SWANRKVRTM GRKSQIESFK DKSLSNGSFF LDLLWAVEPR VVNWNLVTKG ETDEEKRLNA TYIVSVARKL
0701: GCSVFLLPED IVEVNQKMIL ILTASIMYWS LQKRSTESSD SSSSQSTTTT CTTTSTDASP APSVTGEDEV SSLSGEVSSL AVDDNEADAV AIICNHQRAV
0801: TKSHGAQVKK LKDKIDELKE GLKQLKTNLK RAKKGEDPLE GSDGKKTRNI TPEAWEKKIT QQKMKAEKME RDMQTKEDLK TVALGTSKIN YMDPRITVAW
0901: CKRNEVPIEK SNDRLEEVKR KRGVEMSDLD KQIEQLKRCE PLSESEVKSL CLKAMEILVE ESNVQRVDAP VTLCGDIHGQ FYDMMELFKV GGDCPKTNYL
1001: FLGDFVDRGY YSVETFLLLL ALKVRYPDRI TLIRGNHESR QITQVYGFYD ECLRKYGSVN VWRYCTDIFD YMSLSAVVEN KIFCVHGGLS PAIITLDQIR
1101: TIDRKQEVPH DGAMCDLLWS DPEDIVDGWG LSPRGAGFLF GGSVVSSFNH TNNIDYIARA HQLVMEGYKW MFDSQIVTVW SAPNYCYRCG NVASILELDE
1201: NLNKEFRVFE AAQQDSRGPP AKKPAPDYFL

Best Arabidopsis Sequence Match ( AT4G26700.4 )
(BLAST)

001: MSGYVGVVVS DPWLQSQFTQ VELRTLNSKY VSVKNQNGKV TIEDLPPLFA KLKALSATFK EDEIKGMLGE LGSDTSTDVS FEEFLKIYLN LLSKAAEKSG
101: GHHKNSSSFL KACTTTLLHT IYQSEKGPFV QHINRYLGDD PFLKQFLPLD PHSNQLYELV KDGVLLCKLI NVAVPGTIDE RAINTKRVLN PWERNENHTL
201: CLNSAKAVGC SVVNIGTQDL AEGRPHLVLG LISQLIKIQV LADLNLKKTP QLVELLEDSD DVEELLRLPP EKVLLKWMNF HLKKGGYKKT VSNFSADLKD
301: AQAYAFLLNV LAPEHCDPAT LDAKDPLERA ELVLSHAERM NCKRYLTAEE IVEGSSTLNL AFVAQIFHER NGLNKDGKYA FAEMMTEDVE TCRDERCYRL
401: WINSLGIDSY VNNVFEDVRN GWILLEVLDK VSPSSVNWKH ASKPPIKMPF RKVENCNQVI KIGKQLKFSL VNVAGNDIVQ GNKKLILGLL WQLMRFHMLQ
501: LLKSLRSRTL GKEMTDADIL SWANRKVRTM GRKLQIESFK DKSLSSGLFF LNLLWAVEPR VVNWNLVTKG ETDDEKRLNA TYIVSVARKL GCSVFLLPED
601: IVEVNQKMIL ILTASIMYWS LQRHSRESSD SSSTQSTTTT CTSTASSPAP SVTEEEEVSS LSGEVTSLAV GDAVSEITTV SEEASIE

Arabidopsis Description

FIM1Fimbrin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q7G188]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.