Factsheet for Bra005009.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10577	Canola	cytosol	98.28	97.94
CDY20490	Canola	cytosol	98.97	91.4
AT2G39840.1	Thale cress	cytosol	95.52	86.29
KRH73092	Soybean	cytosol, nucleus	88.28	81.01
KRH15048	Soybean	cytosol	87.93	80.95
PGSC0003DMT400017290	Potato	cytosol	83.1	79.28
Solyc06g030490.2.1	Tomato	cytosol	83.1	79.28
VIT_13s0019g02410.t01	Wine grape	cytosol	85.52	79.23
GSMUA_Achr8P19510_001	Banana	cytosol	76.21	79.21
Os03t0268000-01	Rice	cytosol	86.55	77.95
HORVU4Hr1G060490.1	Barley	cytosol	86.21	77.88
TraesCS4D01G211500.1	Wheat	cytosol	86.21	77.88
TraesCS4A01G093600.1	Wheat	cytosol	86.21	77.88
TraesCS4B01G210800.1	Wheat	cytosol	85.86	77.57
HORVU4Hr1G060530.1	Barley	mitochondrion, peroxisome	83.1	77.49
EER95117	Sorghum	cytosol	84.48	76.09
Bra018397.1-P	Field mustard	cytosol	79.66	75.74
Zm00001d047835_P003	Maize	cytosol, extracellular, plasma membrane	82.76	74.3
Bra006731.1-P	Field mustard	cytosol	77.93	73.14
Bra000475.1-P	Field mustard	cytosol	80.0	72.96
Bra002590.1-P	Field mustard	cytosol	77.24	72.03
Bra020335.1-P	Field mustard	cytosol	77.24	71.79
Bra018191.1-P	Field mustard	cytosol	75.17	70.32
Bra027677.1-P	Field mustard	cytosol	75.17	67.91
Bra035240.1-P	Field mustard	cytosol	74.48	67.5
Bra033678.1-P	Field mustard	cytosol	75.17	67.49
Bra009941.1-P	Field mustard	cytosol	73.79	67.08
Bra039424.1-P	Field mustard	cytosol	73.45	66.36
Bra040535.1-P	Field mustard	cytosol	72.41	66.04
Bra001155.1-P	Field mustard	cytosol	72.07	65.72
Bra000740.1-P	Field mustard	cytosol	72.41	65.42
Bra020573.1-P	Field mustard	cytosol	73.45	61.92
Zm00001d028568_P004	Maize	cytosol	84.83	60.0
Bra000153.1-P	Field mustard	cytosol	95.17	56.33
Bra016247.1-P	Field mustard	cytosol	43.79	41.5
Bra031712.1-P	Field mustard	cytosol	43.1	40.85
Bra027833.1-P	Field mustard	cytosol	41.72	39.54
Bra019934.1-P	Field mustard	cytosol	41.72	39.54
Bra019089.1-P	Field mustard	cytosol	41.03	39.02
Bra016870.1-P	Field mustard	cytosol	41.03	38.02
Bra014569.1-P	Field mustard	cytosol	40.69	37.7
Bra007398.1-P	Field mustard	cytosol	40.69	37.7
Bra003340.1-P	Field mustard	cytosol	40.34	37.62
Bra038247.1-P	Field mustard	cytosol	38.62	36.96
Bra001770.1-P	Field mustard	cytosol	38.28	36.63
Bra000262.1-P	Field mustard	cytosol	40.69	35.87
Bra004705.1-P	Field mustard	cytosol	40.34	34.72
Bra035830.1-P	Field mustard	cytosol	37.93	32.64
Bra027930.1-P	Field mustard	cytosol	21.03	32.62
Bra014246.1-P	Field mustard	cytosol	37.93	31.7
Bra026408.1-P	Field mustard	cytosol	41.38	9.76

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	EnsemblPlantsGene:Bra005009	EnsemblPlants:Bra005009.1
EnsemblPlants:Bra005009.1-P	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052	UniProt:M4CLC2	InterPro:Metallo-depent_PP-like	PFAM:PF00149
PFAM:PF16891	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF403	SMART:SM00156
SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI00025473DA	:	:

Description

AT2G39840 (E=1e-109) TOPP4 | TOPP4; protein serine/threonine phosphatase

Coordinates

chrA05:-:2949556..2951061

Molecular Weight (calculated)

32923.8 Da

IEP (calculated)

5.677

GRAVY (calculated)

-0.129

Length

290 amino acids

Sequence
(BLAST)

001: MATTAIESAV LDDIIRRLTE VRLARPGKQV QLSEAEIKQL CTTARDIFLQ QPNLLELAPI KICGDIHGKY SDLLRLFEYG GFPPNANYLF LGDYVDRGKQ
101: SLETICLLLA YKIKYPGNFF LLRGNHECAS INPIYGFYDE CKRRFNVRVW KVFTDCFNCL PVAALIDDKI LCMHGGLSPE LNHLDEVRSL PRPTMIPDTG
201: VSYTFGPDKV SEFLEKHDLD LVCRAHQVVE DGYEFFADRQ QVTVFSAPNY CGEFDNAGAM MSVDENLMCS FQVLKPAEKK SNKFMMSTKI

Best Arabidopsis Sequence Match ( AT2G39840.1 )
(BLAST)

001: MATTTTTQGQ QTAIDSAVLD DIIRRLTEVR LARPGKQVQL SEAEIKQLCT TARDIFLQQP NLLELEAPIK ICGDIHGQYS DLLRLFEYGG FPPSANYLFL
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I

Arabidopsis Description

TOPP4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VUA1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.