Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- vacuole 1
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400017290 | Potato | cytosol | 99.34 | 99.34 |
| KRH15048 | Soybean | cytosol | 90.13 | 86.98 |
| KRH73092 | Soybean | cytosol, nucleus | 89.8 | 86.39 |
| VIT_13s0019g02410.t01 | Wine grape | cytosol | 88.16 | 85.62 |
| CDY61002 | Canola | cytosol | 89.47 | 85.53 |
| CDY24946 | Canola | cytosol | 89.14 | 85.22 |
| AT2G39840.1 | Thale cress | cytosol | 89.8 | 85.05 |
| CDY20490 | Canola | cytosol | 87.83 | 85.03 |
| HORVU4Hr1G060530.1 | Barley | mitochondrion, peroxisome | 86.51 | 84.57 |
| GSMUA_Achr8P19510_001 | Banana | cytosol | 76.97 | 83.87 |
| CDY10577 | Canola | cytosol | 80.26 | 83.85 |
| TraesCS4A01G093600.1 | Wheat | cytosol | 88.49 | 83.8 |
| HORVU4Hr1G060490.1 | Barley | cytosol | 88.49 | 83.8 |
| TraesCS4D01G211500.1 | Wheat | cytosol | 88.49 | 83.8 |
| TraesCS4B01G210800.1 | Wheat | cytosol | 88.16 | 83.49 |
| Bra005009.1-P | Field mustard | cytosol | 79.28 | 83.1 |
| Os03t0268000-01 | Rice | cytosol | 87.83 | 82.92 |
| EER95117 | Sorghum | cytosol | 87.5 | 82.61 |
| Solyc06g053630.2.1 | Tomato | cytosol | 86.51 | 81.68 |
| Solyc06g076430.2.1 | Tomato | cytosol, nucleus | 82.57 | 80.97 |
| Zm00001d047835_P003 | Maize | cytosol, extracellular, plasma membrane | 85.53 | 80.5 |
| Solyc06g005800.2.1 | Tomato | cytosol, nucleus | 83.55 | 79.62 |
| Solyc05g055060.2.1 | Tomato | cytosol, nucleus | 84.21 | 78.77 |
| Solyc09g090060.2.1 | Tomato | cytosol | 83.88 | 77.27 |
| Solyc01g099860.2.1 | Tomato | cytosol, unclear | 72.7 | 70.16 |
| Zm00001d028568_P004 | Maize | cytosol | 87.17 | 64.63 |
| Bra000153.1-P | Field mustard | cytosol | 89.47 | 55.51 |
| Solyc07g065020.2.1 | Tomato | cytosol | 46.38 | 46.23 |
| Solyc05g006590.2.1 | Tomato | cytosol | 46.38 | 46.08 |
| Solyc01g011340.2.1 | Tomato | cytosol, plastid | 45.72 | 45.42 |
| Solyc01g034020.2.1 | Tomato | cytosol | 43.09 | 42.81 |
| Solyc01g005950.2.1 | Tomato | cytosol, extracellular | 43.75 | 42.49 |
| Solyc01g073650.2.1 | Tomato | cytosol | 43.42 | 42.31 |
| Solyc06g072140.2.1 | Tomato | cytosol | 40.79 | 40.92 |
| Solyc03g019900.2.1 | Tomato | cytosol | 40.79 | 40.92 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.1.1 | Gene3D:3.60.21.10 | InterPro:Calcineurin-like_PHP_ApaH | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0006470 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010161 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0046872 | InterPro:IPR029052 | UniProt:K4C4H2 | InterPro:Metallo-depent_PP-like |
| PFAM:PF00149 | PFAM:PF16891 | PRINTS:PR00114 | ScanProsite:PS00125 | PANTHER:PTHR11668 | PANTHER:PTHR11668:SF403 |
| SMART:SM00156 | SUPFAM:SSF56300 | InterPro:STPPase_N | InterPro:Ser/Thr-sp_prot-phosphatase | EnsemblPlantsGene:Solyc06g030490.2 | EnsemblPlants:Solyc06g030490.2.1 |
| UniParc:UPI000276573C | : | : | : | : | : |
Description
Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:K4C4H2]
Coordinates
chr6:+:18839556..18847144
Molecular Weight (calculated)
34526.8 Da
IEP (calculated)
5.455
GRAVY (calculated)
-0.157
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPAAVDRII EKLLEVRLSK PGKLVQLSES EIKQLCVSSR DIFVKQPNLL ELEAPIKICG DIHGQYSDLL RLFEYGGFPP KANYLFLGDY VDRGKQSLET
101: ICLLLAYKIK YPENFFLLRG NHECASINRI YGFYDECKRR FNVKLWKSFT DCFNCLPVAA LIDEKILCMH GGLSPDLSSL DQIRNLPRPT AIPDTGLLCD
201: LLWSDPGKDV KGWGMNDRGV SYTFGPDKVS EFLSKHDLDL VCRAHQVVED GYEFFADRQL VTIFSAPNYC GEFDNAGAMM GVDENLMCSF QILKPAEKKN
301: KFMM
101: ICLLLAYKIK YPENFFLLRG NHECASINRI YGFYDECKRR FNVKLWKSFT DCFNCLPVAA LIDEKILCMH GGLSPDLSSL DQIRNLPRPT AIPDTGLLCD
201: LLWSDPGKDV KGWGMNDRGV SYTFGPDKVS EFLSKHDLDL VCRAHQVVED GYEFFADRQL VTIFSAPNYC GEFDNAGAMM GVDENLMCSF QILKPAEKKN
301: KFMM
001: MATTTTTQGQ QTAIDSAVLD DIIRRLTEVR LARPGKQVQL SEAEIKQLCT TARDIFLQQP NLLELEAPIK ICGDIHGQYS DLLRLFEYGG FPPSANYLFL
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I
Arabidopsis Description
TOPP4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VUA1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.