CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
nucleus 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0268000-01	Rice	cytosol	95.65	95.65
HORVU4Hr1G060490.1	Barley	cytosol	94.1	94.39
TraesCS4A01G093600.1	Wheat	cytosol	94.1	94.39
TraesCS4D01G211500.1	Wheat	cytosol	94.1	94.39
Zm00001d047835_P003	Maize	cytosol, extracellular, plasma membrane	94.41	94.12
TraesCS4B01G210800.1	Wheat	cytosol	93.79	94.08
HORVU4Hr1G060530.1	Barley	mitochondrion, peroxisome	87.58	90.68
Solyc06g030490.2.1	Tomato	cytosol	82.61	87.5
PGSC0003DMT400017290	Potato	cytosol	82.61	87.5
CDY61002	Canola	cytosol	86.02	87.11
VIT_06s0004g05530.t01	Wine grape	cytosol	81.37	87.04
KRH73092	Soybean	cytosol, nucleus	85.4	87.03
VIT_13s0019g02410.t01	Wine grape	cytosol	84.47	86.9
CDY24946	Canola	cytosol	85.71	86.79
KRH15048	Soybean	cytosol	84.16	86.03
GSMUA_Achr8P19510_001	Banana	cytosol	74.53	86.02
CDY20490	Canola	cytosol	83.85	85.99
AT2G39840.1	Thale cress	cytosol	85.71	85.98
CDX88683	Canola	cytosol	82.3	85.76
AT5G59160.1	Thale cress	cytosol	82.92	85.58
CDY71651	Canola	cytosol	58.7	85.52
CDY10577	Canola	cytosol	77.02	85.22
Bra002590.1-P	Field mustard	cytosol	82.3	85.21
CDX71136	Canola	cytosol	81.68	85.11
CDY32662	Canola	cytosol	82.3	84.94
Bra020335.1-P	Field mustard	cytosol	82.3	84.94
Bra006731.1-P	Field mustard	cytosol	81.37	84.79
Bra005009.1-P	Field mustard	cytosol	76.09	84.48
CDY33013	Canola	cytosol	79.5	83.66
Solyc06g076430.2.1	Tomato	cytosol, nucleus	80.43	83.55
CDX80301	Canola	cytosol	79.19	83.33
PGSC0003DMT400078199	Potato	cytosol	80.12	83.23
CDY02866	Canola	cytosol	82.61	82.35
Bra018397.1-P	Field mustard	cytosol	77.95	82.3
AT2G29400.1	Thale cress	cytosol	81.06	82.08
AT3G46820.1	Thale cress	cytosol	79.5	82.05
Solyc06g005800.2.1	Tomato	cytosol, nucleus	81.06	81.82
Bra018191.1-P	Field mustard	cytosol	78.57	81.61
CDX83308	Canola	cytosol	80.12	81.13
Bra000475.1-P	Field mustard	cytosol	80.12	81.13
CDY40180	Canola	cytosol	79.81	81.07
CDX95749	Canola	cytosol	79.81	80.31
CDY45437	Canola	cytosol	79.5	80.25
CDX86100	Canola	cytosol	75.16	79.08
PGSC0003DMT400053683	Potato	cytosol	63.98	78.93
EES13960	Sorghum	cytosol	74.22	78.36
Zm00001d028568_P004	Maize	cytosol	97.83	76.83
EER89259	Sorghum	cytosol	74.84	74.38
KXG31386	Sorghum	cytosol	77.95	68.39
EES02921	Sorghum	cytosol	68.94	68.31
EER90463	Sorghum	cytosol	65.22	60.17
Bra000153.1-P	Field mustard	cytosol	86.02	56.53
OQU77459	Sorghum	cytosol	69.57	47.16
KXG37326	Sorghum	cytosol	42.24	44.3
EER98649	Sorghum	cytosol	41.93	43.97
EER88560	Sorghum	cytosol	41.3	43.46
EES06511	Sorghum	cytosol	41.3	43.46
EER94259	Sorghum	cytosol	40.99	41.9
EES01303	Sorghum	cytosol	36.02	38.28
EER95434	Sorghum	plastid	41.61	34.81
CDX89311	Canola	cytosol, plastid	25.47	11.88

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	EntrezGene:8084952	UniProt:C5WQ33
InterPro:Calcineurin-like_PHP_ApaH	EnsemblPlants:EER95117	ProteinID:EER95117	ProteinID:EER95117.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0006470	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009987	GO:GO:0010161	GO:GO:0016787
GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PFAM:PF16891
PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF403	SMART:SM00156	EnsemblPlantsGene:SORBI_3001G425000
SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI0001A83140	RefSeq:XP_002468119.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:70496440..70498844

Molecular Weight (calculated)

36307.6 Da

IEP (calculated)

4.891

GRAVY (calculated)

-0.181

Length

322 amino acids

Sequence
(BLAST)

001: MAAAPAAGGQ GGVGMDTALV DDIIRRLLEV RTARPGKQVQ LSESEIRQLC NVSREIFLSQ PNLLELEAPI KICGDIHGQY SDLLRLFEYG GFPPEANYLF
101: LGDYVDRGKQ SLETICLLLA YKIKYPENFF LLRGNHECAS INRIYGFYDE CKRRFNVRLW KVFTECFNTL PVAALIDDKI LCMHGGLSPD LAHLDEIKSL
201: QRPTDVPDQG LLCDLLWSDP GKDVQGWGMN DRGVSYTFGA DKVSEFLQKH DLDLICRAHQ VVEDGYEFFA DRQLVTIFSA PNYCGEFDNA GAMMSVDETL
301: MCSFQILKPA ERKNKFMGSN KM

Best Arabidopsis Sequence Match ( AT2G39840.1 )
(BLAST)

001: MATTTTTQGQ QTAIDSAVLD DIIRRLTEVR LARPGKQVQL SEAEIKQLCT TARDIFLQQP NLLELEAPIK ICGDIHGQYS DLLRLFEYGG FPPSANYLFL
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I

Arabidopsis Description

TOPP4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VUA1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.