Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88683 | Canola | cytosol | 97.12 | 98.06 |
| Bra020335.1-P | Field mustard | cytosol | 97.44 | 97.44 |
| CDY32662 | Canola | cytosol | 97.44 | 97.44 |
| Bra002590.1-P | Field mustard | cytosol | 97.12 | 97.43 |
| CDX71136 | Canola | cytosol | 96.47 | 97.41 |
| Bra006731.1-P | Field mustard | cytosol | 95.83 | 96.76 |
| CDY33013 | Canola | cytosol | 94.23 | 96.08 |
| CDX80301 | Canola | cytosol | 93.59 | 95.42 |
| CDY02866 | Canola | cytosol | 97.44 | 94.12 |
| AT3G46820.1 | Thale cress | cytosol | 92.31 | 92.31 |
| VIT_06s0004g05530.t01 | Wine grape | cytosol | 83.01 | 86.05 |
| PGSC0003DMT400078199 | Potato | cytosol | 85.26 | 85.81 |
| Solyc06g076430.2.1 | Tomato | cytosol, nucleus | 85.26 | 85.81 |
| Os03t0268000-01 | Rice | cytosol | 86.54 | 83.85 |
| HORVU4Hr1G060490.1 | Barley | cytosol | 86.22 | 83.8 |
| TraesCS4A01G093600.1 | Wheat | cytosol | 86.22 | 83.8 |
| TraesCS4D01G211500.1 | Wheat | cytosol | 86.22 | 83.8 |
| Solyc06g005800.2.1 | Tomato | cytosol, nucleus | 85.58 | 83.7 |
| GSMUA_Achr8P19510_001 | Banana | cytosol | 74.68 | 83.51 |
| TraesCS4B01G210800.1 | Wheat | cytosol | 85.9 | 83.49 |
| EER95117 | Sorghum | cytosol | 85.58 | 82.92 |
| HORVU4Hr1G060530.1 | Barley | mitochondrion, peroxisome | 81.73 | 81.99 |
| Zm00001d047835_P003 | Maize | cytosol, extracellular, plasma membrane | 84.62 | 81.73 |
| PGSC0003DMT400053683 | Potato | cytosol | 68.27 | 81.61 |
| AT2G29400.1 | Thale cress | cytosol | 83.01 | 81.45 |
| AT2G39840.1 | Thale cress | cytosol | 82.69 | 80.37 |
| AT1G64040.1 | Thale cress | cytosol | 75.32 | 72.98 |
| AT4G11240.1 | Thale cress | cytosol | 74.68 | 72.36 |
| AT3G05580.1 | Thale cress | cytosol | 73.08 | 71.7 |
| AT5G43380.1 | Thale cress | cytosol | 74.68 | 70.39 |
| AT5G27840.4 | Thale cress | cytosol | 73.4 | 69.39 |
| Zm00001d028568_P004 | Maize | cytosol | 85.9 | 65.37 |
| AT2G42500.1 | Thale cress | cytosol | 44.55 | 44.41 |
| AT1G10430.1 | Thale cress | cytosol | 43.27 | 44.12 |
| AT3G58500.1 | Thale cress | cytosol | 43.91 | 43.77 |
| AT1G59830.1 | Thale cress | cytosol | 42.63 | 43.46 |
| AT4G26720.1 | Thale cress | cytosol | 42.31 | 43.28 |
| AT1G69960.1 | Thale cress | cytosol | 41.99 | 42.67 |
| AT3G19980.1 | Thale cress | cytosol | 39.42 | 40.59 |
| AT1G50370.1 | Thale cress | cytosol | 39.1 | 40.26 |
| AT5G55260.2 | Thale cress | cytosol | 43.91 | 39.6 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.1.1 | Gene3D:3.60.21.10 | EntrezGene:836034 | UniProt:A0A178UGI0 |
| ProteinID:AED97150.1 | ProteinID:AED97151.1 | ProteinID:AED97152.1 | EMBL:AK317649 | ArrayExpress:AT5G59160 | EnsemblPlantsGene:AT5G59160 |
| RefSeq:AT5G59160 | TAIR:AT5G59160 | RefSeq:AT5G59160-TAIR-G | EnsemblPlants:AT5G59160.1 | TAIR:AT5G59160.1 | EMBL:AY042840 |
| Unigene:At.20932 | UniProt:B9DHU3 | ProteinID:BAB09762.1 | EMBL:BT002401 | EMBL:BT024861 | InterPro:Calcineurin-like_PHP_ApaH |
| GO:GO:0000164 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0046872 | InterPro:IPR029052 | EMBL:M93409 | InterPro:Metallo-depent_PP-like | RefSeq:NP_001032103.1 | RefSeq:NP_200724.1 |
| RefSeq:NP_851218.1 | ProteinID:OAO93016.1 | UniProt:P48482 | PFAM:PF00149 | PFAM:PF16891 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00114 | ScanProsite:PS00125 | PANTHER:PTHR11668 | PANTHER:PTHR11668:SF392 |
| SMART:SM00156 | SUPFAM:SSF56300 | InterPro:STPPase_N | InterPro:Ser/Thr-sp_prot-phosphatase | Symbol:TOPP2 | UniParc:UPI000000BD80 |
| EMBL:Z12163 | : | : | : | : | : |
Description
TOPP2Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UGI0]
Coordinates
chr5:+:23879236..23881840
Molecular Weight (calculated)
35533.8 Da
IEP (calculated)
4.963
GRAVY (calculated)
-0.213
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQQGQGSMD PAALDDIIRR LLDYRNPKPG TKQAMLNESE IRQLCIVSRE IFLQQPNLLE LEAPIKICGD IHGQYSDLLR LFEYGGFPPT ANYLFLGDYV
101: DRGKQSLETI CLLLAYKIKY PENFFLLRGN HECASINRIY GFYDECKRRF SVRLWKVFTD SFNCLPVAAV IDDKILCMHG GLSPDLTNVE QIKNIKRPTD
201: VPDSGLLCDL LWSDPSKDVK GWGMNDRGVS YTFGPDKVAE FLIKNDMDLI CRAHQVVEDG YEFFADRQLV TIFSAPNYCG EFDNAGAMMS VDESLMCSFQ
301: ILKPADRKPR FL
101: DRGKQSLETI CLLLAYKIKY PENFFLLRGN HECASINRIY GFYDECKRRF SVRLWKVFTD SFNCLPVAAV IDDKILCMHG GLSPDLTNVE QIKNIKRPTD
201: VPDSGLLCDL LWSDPSKDVK GWGMNDRGVS YTFGPDKVAE FLIKNDMDLI CRAHQVVEDG YEFFADRQLV TIFSAPNYCG EFDNAGAMMS VDESLMCSFQ
301: ILKPADRKPR FL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.