Factsheet for Bra000475.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83308	Canola	cytosol	100.0	100.0
CDX95749	Canola	cytosol	99.69	99.06
Bra018397.1-P	Field mustard	cytosol	92.14	96.07
AT2G29400.1	Thale cress	cytosol	95.91	95.91
VIT_06s0004g05530.t01	Wine grape	cytosol	81.13	85.71
Bra002590.1-P	Field mustard	cytosol	83.33	85.21
Bra020335.1-P	Field mustard	cytosol	82.7	84.29
Bra006731.1-P	Field mustard	cytosol	81.13	83.5
PGSC0003DMT400078199	Potato	cytosol	80.5	82.58
Solyc06g076430.2.1	Tomato	cytosol, nucleus	80.5	82.58
Bra018191.1-P	Field mustard	cytosol	79.87	81.94
GSMUA_Achr8P19510_001	Banana	cytosol	71.07	81.0
Solyc06g005800.2.1	Tomato	cytosol, nucleus	81.13	80.88
Os03t0268000-01	Rice	cytosol	81.45	80.43
TraesCS4A01G093600.1	Wheat	cytosol	81.13	80.37
TraesCS4D01G211500.1	Wheat	cytosol	81.13	80.37
HORVU4Hr1G060490.1	Barley	cytosol	81.13	80.37
EER95117	Sorghum	cytosol	81.13	80.12
TraesCS4B01G210800.1	Wheat	cytosol	80.82	80.06
Bra005009.1-P	Field mustard	cytosol	72.96	80.0
Zm00001d047835_P003	Maize	cytosol, extracellular, plasma membrane	80.19	78.95
HORVU4Hr1G060530.1	Barley	mitochondrion, peroxisome	77.04	78.78
PGSC0003DMT400053683	Potato	cytosol	64.15	78.16
Bra033678.1-P	Field mustard	cytosol	75.47	74.3
Bra027677.1-P	Field mustard	cytosol	73.9	73.21
Bra000740.1-P	Field mustard	cytosol	73.9	73.21
Bra035240.1-P	Field mustard	cytosol	73.58	73.12
Bra009941.1-P	Field mustard	cytosol	72.64	72.41
Bra040535.1-P	Field mustard	cytosol	71.7	71.7
Bra001155.1-P	Field mustard	cytosol	71.38	71.38
Bra039424.1-P	Field mustard	cytosol	71.7	71.03
Bra020573.1-P	Field mustard	cytosol	71.7	66.28
Zm00001d028568_P004	Maize	cytosol	81.45	63.17
Bra000153.1-P	Field mustard	cytosol	80.19	52.04
Bra016870.1-P	Field mustard	cytosol	43.71	44.41
Bra027833.1-P	Field mustard	cytosol	42.45	44.12
Bra019934.1-P	Field mustard	cytosol	42.45	44.12
Bra014569.1-P	Field mustard	cytosol	43.4	44.09
Bra007398.1-P	Field mustard	cytosol	43.4	44.09
Bra031712.1-P	Field mustard	cytosol	42.14	43.79
Bra016247.1-P	Field mustard	cytosol	42.14	43.79
Bra003340.1-P	Field mustard	cytosol	42.77	43.73
Bra019089.1-P	Field mustard	cytosol	41.82	43.61
Bra038247.1-P	Field mustard	cytosol	40.57	42.57
Bra001770.1-P	Field mustard	cytosol	39.94	41.91
Bra000262.1-P	Field mustard	cytosol	43.08	41.64
Bra004705.1-P	Field mustard	cytosol	42.77	40.36
Bra027930.1-P	Field mustard	cytosol	22.64	38.5
Bra035830.1-P	Field mustard	cytosol	39.62	37.39
Bra014246.1-P	Field mustard	cytosol	40.25	36.89
Bra026408.1-P	Field mustard	cytosol	42.14	10.89

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	EnsemblPlantsGene:Bra000475	EnsemblPlants:Bra000475.1
EnsemblPlants:Bra000475.1-P	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052	UniProt:M4C8E7	InterPro:Metallo-depent_PP-like	PFAM:PF00149
PFAM:PF16891	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF392	SMART:SM00156
SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI000253FFA2	:	:

Description

AT2G29400 (E=3e-177) TOPP1, PP1-AT | TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1); protein serine/threonine phosphatase

Coordinates

chrA03:+:11280943..11282649

Molecular Weight (calculated)

36071.2 Da

IEP (calculated)

4.676

GRAVY (calculated)

-0.200

Length

318 amino acids

Sequence
(BLAST)

001: MADKPAQEQK PAMEPAVLDD IIRRLVEFRN TRPGSGKQVH LSEGEIRQLC AVSKEIFLQQ PNLLELEAPI KICGDIHGQY SDLLRLFEYG GFPPEANYLF
101: LGDYVDRGKQ SLETICLLLA YKIKYPENFF LLRGNHESAS INRIYGFYDE CKRRFNVRLW KIFTDCFNCL PVAALIDDRI LCMHGGISPE LTSLDQIRNI
201: SRPMDIPESG LVCDLLWSDP SGDVKGWGVN DRGVSYTFGA DTVAEFLQKN DMDLICRAHQ VVEDGYEFFA DRQLVTVFSA PNYCGEFDNA GAMMSIDESL
301: MCSFQILKPS DKRSSPFL

Best Arabidopsis Sequence Match ( AT2G29400.1 )
(BLAST)

001: MAEKPAQEQE QKRAMEPAVL DDIIRRLVEF RNTRPGSGKQ VHLSEGEIRQ LCAVSKEIFL QQPNLLELEA PIKICGDIHG QYSDLLRLFE YGGFPPEANY
101: LFLGDYVDRG KQSLETICLL LAYKIKYPEN FFLLRGNHES ASINRIYGFY DECKRRFNVR LWKIFTDCFN CLPVAALIDD RILCMHGGIS PELKSLDQIR
201: NIARPMDIPE SGLVCDLLWS DPSGDVGWGM NDRGVSYTFG ADKVAEFLEK HDMDLICRAH QVVEDGYEFF AERQLVTVFS APNYCGEFDN AGAMMSIDES
301: LMCSFQILKP SEKKSPFL

Arabidopsis Description

TOPP1Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VXL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.