Factsheet for Bra033678.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra016834.1-P
Bra019852.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G43380.1	Bra016834.1-P	AT1G11440.1	21798944
AT5G43380.1	Bra019852.1-P	AT1G11440.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22350	Canola	cytosol	98.45	96.07
AT5G43380.1	Thale cress	cytosol	93.19	90.94
Bra018397.1-P	Field mustard	cytosol	73.68	78.03
Bra000475.1-P	Field mustard	cytosol	74.3	75.47
Bra020335.1-P	Field mustard	cytosol	72.76	75.32
Bra005009.1-P	Field mustard	cytosol	67.49	75.17
Bra006731.1-P	Field mustard	cytosol	71.83	75.08
Bra002590.1-P	Field mustard	cytosol	72.14	74.92
Bra018191.1-P	Field mustard	cytosol	71.83	74.84
Bra027677.1-P	Field mustard	cytosol	73.99	74.45
Bra035240.1-P	Field mustard	cytosol	70.28	70.94
Bra000740.1-P	Field mustard	cytosol	70.28	70.72
Bra009941.1-P	Field mustard	cytosol	69.35	70.22
Bra040535.1-P	Field mustard	cytosol	68.11	69.18
Bra001155.1-P	Field mustard	cytosol	68.11	69.18
Bra039424.1-P	Field mustard	cytosol	68.73	69.16
Bra020573.1-P	Field mustard	cytosol	69.04	64.83
Bra000153.1-P	Field mustard	cytosol	74.92	49.39
Bra031712.1-P	Field mustard	cytosol	41.8	44.12
Bra016247.1-P	Field mustard	cytosol	41.49	43.79
Bra027833.1-P	Field mustard	cytosol	40.87	43.14
Bra014569.1-P	Field mustard	cytosol	41.49	42.81
Bra007398.1-P	Field mustard	cytosol	41.49	42.81
Bra016870.1-P	Field mustard	cytosol	41.49	42.81
Bra019934.1-P	Field mustard	cytosol	40.56	42.81
Bra003340.1-P	Field mustard	cytosol	41.18	42.77
Bra019089.1-P	Field mustard	cytosol	40.25	42.62
Bra038247.1-P	Field mustard	cytosol	39.63	42.24
Bra001770.1-P	Field mustard	cytosol	39.01	41.58
Bra000262.1-P	Field mustard	cytosol	40.87	40.12
Bra004705.1-P	Field mustard	cytosol	40.87	39.17
Bra027930.1-P	Field mustard	cytosol	22.6	39.04
Bra035830.1-P	Field mustard	cytosol	38.7	37.09
Bra014246.1-P	Field mustard	cytosol	38.7	36.02
Bra026408.1-P	Field mustard	cytosol	40.87	10.73

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	EnsemblPlantsGene:Bra033678	EnsemblPlants:Bra033678.1
EnsemblPlants:Bra033678.1-P	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052	UniProt:M4EXY9	InterPro:Metallo-depent_PP-like	PFAM:PF00149
PFAM:PF16891	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF390	SMART:SM00156
SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI000253F797	SEG:seg	:

Description

AT5G43380 (E=2e-169) TOPP6 | TOPP6; protein serine/threonine phosphatase

Coordinates

chrA06:+:25674474..25675599

Molecular Weight (calculated)

36919.6 Da

IEP (calculated)

7.294

GRAVY (calculated)

-0.194

Length

323 amino acids

Sequence
(BLAST)

001: MEAGALNSVI SRLLEAREKP GKIVQLSETE IKQLCFVSRD IFLRQPNLLE LEAPVKICGD IHGQYPDLLR LFEHGGYPPR SNYLFLGDYV DRGKQSLETI
101: CLLLAYKIKF PENFFLLRGN HESASINRIY GFYDECKRRF SVKIWRIFTD CFNCLPVAAL IDDRILCMHG GLSPELRSLR QIRDIRRPTD IPDRGLLCDL
201: LWSDPDKVVR GWGPNDRGVS YTFGSDTVSE FLKRLDLDLI CRAHQVVEDG FEFFANKQLV TIFSAPNYCG EFDNAGAMMS VDEDLICSFQ ILKPNEKKSK
301: FSFGSRGGVK TGFPYPQVKV YIN

Best Arabidopsis Sequence Match ( AT5G43380.2 )
(BLAST)

001: MDPGTLNSVI NRLLEAREKP GKIVQLSETE IKQLCFVSRD IFLRQPNLLE LEAPVKICGD IHGQYPDLLR LFEHGGYPPN SNYLFLGDYV DRGKQSLETI
101: CLLLAYKIKF PENFFLLRGN HESASINRIY GFYDECKRRF SVKIWRIFTD CFNCLPVAAL IDERIFCMHG GLSPELLSLR QIRDIRRPTD IPDRGLLCDL
201: LWSDPDKDVR GWGPNDRGVS YTFGSDIVSG FLKRLDLDLI CRAHQVVEDG FEFFANKQLV TIFSAPNYCG EFDNAGAMMS VSEDLTCSFQ ILKSNDKKSK
301: FSFGSRGGAK TSFPYPKVKV CINHITF

Arabidopsis Description

TOPP7Serine/threonine-protein phosphatase PP1 isozyme 7 [Source:UniProtKB/Swiss-Prot;Acc:O82733]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.