Factsheet for Bra040535.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra028297.1-P
Bra029133.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G05580.1	Bra028297.1-P	AT5G52200.1	21798944
AT3G05580.1	Bra029133.1-P	AT5G52200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18815	Canola	cytosol	99.06	99.06
Bra001155.1-P	Field mustard	cytosol	96.54	96.54
Bra039424.1-P	Field mustard	cytosol	94.97	94.08
AT3G05580.1	Thale cress	cytosol	92.14	92.14
Bra009941.1-P	Field mustard	cytosol	90.25	89.97
KRH68493	Soybean	cytosol	85.85	84.26
Solyc01g099860.2.1	Tomato	cytosol, unclear	82.39	83.17
PGSC0003DMT400063710	Potato	cytosol	82.39	83.17
Bra020573.1-P	Field mustard	cytosol	87.74	81.1
VIT_14s0060g01750.t01	Wine grape	cytosol	82.39	80.62
GSMUA_Achr11P...	Banana	cytosol	73.58	74.05
Bra018397.1-P	Field mustard	cytosol	70.75	73.77
KRG96778	Soybean	nucleus	86.48	73.33
Bra020335.1-P	Field mustard	cytosol	71.7	73.08
Bra002590.1-P	Field mustard	cytosol	71.07	72.67
Os01t0349400-01	Rice	cytosol	74.21	72.62
Bra006731.1-P	Field mustard	cytosol	70.44	72.49
Bra005009.1-P	Field mustard	cytosol	66.04	72.41
EES02921	Sorghum	cytosol	73.9	72.31
Zm00001d037601_P001	Maize	cytosol	67.92	72.0
Bra018191.1-P	Field mustard	cytosol	70.13	71.94
Bra000475.1-P	Field mustard	cytosol	71.7	71.7
TraesCS1A01G095500.1	Wheat	cytosol	73.27	71.69
TraesCS1D01G104400.1	Wheat	cytosol	73.27	71.69
TraesCS1B01G128100.1	Wheat	cytosol	73.27	71.69
GSMUA_Achr2P02240_001	Banana	cytosol	72.33	71.65
HORVU1Hr1G022370.5	Barley	cytosol	72.96	71.17
GSMUA_Achr8P06590_001	Banana	cytosol	61.32	69.64
TraesCS3D01G199300.1	Wheat	cytosol	71.07	69.54
Zm00001d009844_P001	Maize	cytosol	73.58	69.23
Bra027677.1-P	Field mustard	cytosol	69.5	68.85
Bra035240.1-P	Field mustard	cytosol	68.87	68.44
Bra033678.1-P	Field mustard	cytosol	69.18	68.11
Bra000740.1-P	Field mustard	cytosol	67.61	66.98
GSMUA_Achr11P...	Banana	cytosol	73.9	66.57
TraesCS3A01G195500.1	Wheat	cytosol	71.07	65.32
TraesCS3B01G226800.1	Wheat	cytosol	71.07	64.57
HORVU3Hr1G044550.3	Barley	cytosol	55.97	59.53
Zm00001d009181_P005	Maize	cytosol	60.38	52.17
OQU77459	Sorghum	cytosol	73.9	49.47
Bra000153.1-P	Field mustard	cytosol	72.01	46.73
Bra016247.1-P	Field mustard	cytosol	43.4	45.1
Bra016870.1-P	Field mustard	cytosol	44.03	44.73
Bra031712.1-P	Field mustard	cytosol	42.77	44.44
Bra019089.1-P	Field mustard	cytosol	42.45	44.26
Bra019934.1-P	Field mustard	cytosol	42.45	44.12
Bra014569.1-P	Field mustard	cytosol	43.4	44.09
Bra007398.1-P	Field mustard	cytosol	43.4	44.09
Bra003340.1-P	Field mustard	cytosol	43.08	44.05
Bra027833.1-P	Field mustard	cytosol	42.14	43.79
Bra000262.1-P	Field mustard	cytosol	43.71	42.25
Bra038247.1-P	Field mustard	cytosol	39.94	41.91
Bra001770.1-P	Field mustard	cytosol	39.62	41.58
Bra004705.1-P	Field mustard	cytosol	43.4	40.95
Bra027930.1-P	Field mustard	cytosol	23.9	40.64
Bra035830.1-P	Field mustard	cytosol	39.94	37.69
Bra014246.1-P	Field mustard	cytosol	39.94	36.6
Bra026408.1-P	Field mustard	cytosol	42.45	10.98

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	EnsemblPlantsGene:Bra040535	EnsemblPlants:Bra040535.1
EnsemblPlants:Bra040535.1-P	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052	UniProt:M4FHF7	InterPro:Metallo-depent_PP-like	PFAM:PF00149
PFAM:PF16891	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF262	SMART:SM00156
SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI000253EDA1	:	:

Description

AT3G05580 (E=3e-175) | serine/threonine protein phosphatase, putative

Coordinates

chrScaffold000215:+:60501..61681

Molecular Weight (calculated)

36060.5 Da

IEP (calculated)

5.109

GRAVY (calculated)

-0.182

Length

318 amino acids

Sequence
(BLAST)

001: MTTTMEAVME ISMVDDIIRR LLEGKGGKQV QLSEIEIRQL CVNARQIFLN QPNLLDLHAP IRICGDIHGQ YQDLLRLFEY GGYPPSAHYL FLGDYVDRGK
101: QSLETICLLL AYKIRYPSKI FLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKIFTDCFNC LPVSALIDDK ILCMHGGLSP DLENLEQIRE IQRPTEIPDS
201: GLLCDLLWSD PDQKSEGWSD SDRGISCTFG ADVVAEFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYCGEFDN AGALLSVDQS LVCSFETLKP
301: APSSSGIPLK KVPKMGKS

Best Arabidopsis Sequence Match ( AT3G05580.1 )
(BLAST)

001: MMTSMEGMME MGVLDDIIRR LLEGKGGKQV QLSEVEIRQL CVNARQIFLS QPNLLELHAP IRICGDIHGQ YQDLLRLFEY GGYPPSANYL FLGDYVDRGK
101: QSLETICLLL AYKIRYPSKI FLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKIFTDCFNC LPVAALIDEK ILCMHGGLSP ELENLGQIRE IQRPTEIPDN
201: GLLCDLLWSD PDQKNEGWTD SDRGISCTFG ADVVADFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDQS LVCSFEILKP
301: APASSTNPLK KVPKMGKS

Arabidopsis Description

TOPP9Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VKY6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.