Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G199300.1 | Wheat | cytosol | 91.33 | 97.23 |
| Os01t0349400-01 | Rice | cytosol | 87.57 | 93.23 |
| TraesCS3B01G226800.1 | Wheat | cytosol | 92.49 | 91.43 |
| EES02921 | Sorghum | cytosol | 85.26 | 90.77 |
| TraesCS1A01G095500.1 | Wheat | cytosol | 83.24 | 88.62 |
| HORVU3Hr1G044550.3 | Barley | cytosol | 70.52 | 81.61 |
| GSMUA_Achr11P... | Banana | cytosol | 72.54 | 79.43 |
| GSMUA_Achr2P02240_001 | Banana | cytosol | 72.83 | 78.5 |
| GSMUA_Achr8P06590_001 | Banana | cytosol | 60.98 | 75.36 |
| TraesCS6A01G404700.1 | Wheat | cytosol | 64.74 | 73.68 |
| CDX86135 | Canola | cytosol | 53.76 | 73.23 |
| Solyc01g099860.2.1 | Tomato | cytosol, unclear | 66.47 | 73.02 |
| PGSC0003DMT400063710 | Potato | cytosol | 66.47 | 73.02 |
| CDY05560 | Canola | cytosol | 66.76 | 72.64 |
| CDY25019 | Canola | cytosol | 66.47 | 72.33 |
| Bra039424.1-P | Field mustard | cytosol | 66.76 | 71.96 |
| AT3G05580.1 | Thale cress | cytosol | 65.9 | 71.7 |
| Bra001155.1-P | Field mustard | cytosol | 65.9 | 71.7 |
| CDY27754 | Canola | cytosol | 66.47 | 71.65 |
| CDY05182 | Canola | cytosol | 66.47 | 71.65 |
| KRH68493 | Soybean | cytosol | 67.05 | 71.6 |
| CDX80617 | Canola | cytosol | 65.9 | 71.47 |
| Bra009941.1-P | Field mustard | cytosol | 65.61 | 71.16 |
| GSMUA_Achr11P... | Banana | cytosol | 72.54 | 71.1 |
| Bra040535.1-P | Field mustard | cytosol | 65.32 | 71.07 |
| CDY18815 | Canola | cytosol | 65.32 | 71.07 |
| TraesCS7A01G126500.1 | Wheat | cytosol | 65.32 | 70.41 |
| VIT_14s0060g01750.t01 | Wine grape | cytosol | 65.61 | 69.85 |
| TraesCS4A01G093600.1 | Wheat | cytosol | 64.74 | 69.78 |
| AT5G27840.4 | Thale cress | cytosol | 65.32 | 68.48 |
| TraesCS6A01G396400.1 | Wheat | cytosol | 63.01 | 68.12 |
| Zm00001d009181_P005 | Maize | cytosol | 72.25 | 67.93 |
| Bra020573.1-P | Field mustard | cytosol | 66.47 | 66.86 |
| CDY40717 | Canola | cytosol | 66.47 | 63.19 |
| TraesCS4A01G315000.1 | Wheat | cytosol | 58.96 | 62.58 |
| KRG96778 | Soybean | nucleus | 67.05 | 61.87 |
| CDX74139 | Canola | cytosol | 66.19 | 60.9 |
| TraesCS3A01G081200.1 | Wheat | cytosol | 28.61 | 50.51 |
| TraesCS6A01G183700.1 | Wheat | cytosol | 40.17 | 45.42 |
| TraesCS7A01G364400.1 | Wheat | cytosol | 39.88 | 45.25 |
| TraesCS5A01G455000.1 | Wheat | cytosol | 36.99 | 45.23 |
| TraesCS5A01G176800.1 | Wheat | cytosol | 39.88 | 44.95 |
| TraesCS5A01G270900.1 | Wheat | cytosol | 39.6 | 44.63 |
| TraesCS4A01G020400.1 | Wheat | cytosol | 38.73 | 41.74 |
| TraesCS3A01G261200.1 | Wheat | cytosol | 35.26 | 40.26 |
| TraesCS1A01G373300.1 | Wheat | cytosol | 34.68 | 33.52 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G195500.1 | EnsemblPlantsGene:TraesCS3A01G195500 | Gene3D:3.60.21.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:Calcineurin-like_PHP_ApaH | InterPro:IPR029052 | InterPro:Metallo-depent_PP-like | InterPro:STPPase_N | InterPro:Ser/Thr-sp_prot-phosphatase | KEGG:04658+3.1.3.16 |
| KEGG:04660+3.1.3.16 | PANTHER:PTHR11668 | PANTHER:PTHR11668:SF305 | PFAM:PF00149 | PFAM:PF16891 | PRINTS:PR00114 |
| ScanProsite:PS00125 | SEG:seg | SMART:SM00156 | SUPFAM:SSF56300 | MapMan:18.4.24.1.1 | : |
Description
No Description!
Coordinates
chr3A:-:283093900..283112407
Molecular Weight (calculated)
38946.1 Da
IEP (calculated)
5.466
GRAVY (calculated)
-0.159
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMTRASMGA MDGAALDEVV RRLVEGGRGG RQVQLSEAEI RQLCVEAKRV LLSQPNLLRI PAPVKICGDI HGQFVDLLRL FDLGGYPPTS TYLFLGDYVD
101: RGKQSLETIC LLLAYKVKYP DKVFLLRGNH EDAKINRVYG FYDECKRRFN VRLWKIFCDC FNCLPMAALI DDKIFCMHGG LSPELNSLDQ IKDIERPVEI
201: PDYGLLCDLL WSDPSSDTQG WGESDRGVAC TFGADKLVEF LEKNDLDLIC RAHQVVEDDY EFFAERRLVT IFSAPNYCGE FDNAGALLSI DESLMCSFQI
301: LKPKETGAPH SRKPISNKVG PDGHGDIYLQ VRHVGLPSKP YGCIRM
101: RGKQSLETIC LLLAYKVKYP DKVFLLRGNH EDAKINRVYG FYDECKRRFN VRLWKIFCDC FNCLPMAALI DDKIFCMHGG LSPELNSLDQ IKDIERPVEI
201: PDYGLLCDLL WSDPSSDTQG WGESDRGVAC TFGADKLVEF LEKNDLDLIC RAHQVVEDDY EFFAERRLVT IFSAPNYCGE FDNAGALLSI DESLMCSFQI
301: LKPKETGAPH SRKPISNKVG PDGHGDIYLQ VRHVGLPSKP YGCIRM
001: MMTSMEGMME MGVLDDIIRR LLEGKGGKQV QLSEVEIRQL CVNARQIFLS QPNLLELHAP IRICGDIHGQ YQDLLRLFEY GGYPPSANYL FLGDYVDRGK
101: QSLETICLLL AYKIRYPSKI FLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKIFTDCFNC LPVAALIDEK ILCMHGGLSP ELENLGQIRE IQRPTEIPDN
201: GLLCDLLWSD PDQKNEGWTD SDRGISCTFG ADVVADFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDQS LVCSFEILKP
301: APASSTNPLK KVPKMGKS
101: QSLETICLLL AYKIRYPSKI FLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKIFTDCFNC LPVAALIDEK ILCMHGGLSP ELENLGQIRE IQRPTEIPDN
201: GLLCDLLWSD PDQKNEGWTD SDRGISCTFG ADVVADFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDQS LVCSFEILKP
301: APASSTNPLK KVPKMGKS
Arabidopsis Description
TOPP9Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VKY6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.