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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY00518
CDY31914
CDY32592
CDY38907

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G05580.1 CDY00518 AT5G52200.1 21798944
AT3G05580.1 CDY31914 AT5G52200.1 21798944
AT3G05580.1 CDY32592 AT5G52200.1 21798944
AT3G05580.1 CDY38907 AT5G52200.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039424.1-P Field mustard cytosol 99.69 99.69
CDY05182 Canola cytosol 99.69 99.69
CDY18815 Canola cytosol 95.33 96.23
AT3G05580.1 Thale cress cytosol 92.83 93.71
CDX80617 Canola cytosol 90.34 90.91
CDY25019 Canola cytosol 90.03 90.88
CDY05560 Canola cytosol 89.72 90.57
CDX86135 Canola cytosol 71.65 90.55
KRH68493 Soybean cytosol 86.92 86.11
Solyc01g099860.2.1 Tomato cytosol, unclear 82.55 84.13
PGSC0003DMT400063710 Potato cytosol 82.55 84.13
CDY40717 Canola cytosol 95.33 84.07
VIT_14s0060g01750.t01 Wine grape cytosol 82.87 81.85
CDX74139 Canola cytosol 95.02 81.12
CDY71651 Canola cytosol 53.89 78.28
GSMUA_Achr11P... Banana cytosol 74.77 75.95
CDX88683 Canola cytosol 71.65 74.43
KRG96778 Soybean nucleus 86.92 74.4
CDY10577 Canola cytosol 66.98 73.88
CDX71136 Canola cytosol 71.03 73.79
CDY32662 Canola cytosol 71.65 73.72
CDY20490 Canola cytosol 71.96 73.57
GSMUA_Achr2P02240_001 Banana cytosol 73.52 73.52
Os01t0349400-01 Rice cytosol 73.83 72.92
TraesCS1A01G095500.1 Wheat cytosol 73.83 72.92
TraesCS1B01G128100.1 Wheat cytosol 73.83 72.92
TraesCS1D01G104400.1 Wheat cytosol 73.83 72.92
CDY33013 Canola cytosol 69.47 72.88
Zm00001d037601_P001 Maize cytosol 67.91 72.67
CDY61002 Canola cytosol 71.96 72.64
CDX80301 Canola cytosol 69.16 72.55
HORVU1Hr1G022370.5 Barley cytosol 73.52 72.39
CDY24946 Canola cytosol 71.65 72.33
EES02921 Sorghum cytosol 72.9 72.0
CDY40180 Canola cytosol 71.03 71.92
CDX83308 Canola cytosol 71.03 71.7
CDY02866 Canola cytosol 71.65 71.21
CDY45437 Canola cytosol 70.72 71.16
CDX95749 Canola cytosol 70.72 70.94
TraesCS3D01G199300.1 Wheat cytosol 71.65 70.77
GSMUA_Achr8P06590_001 Banana cytosol 61.37 70.36
CDY25556 Canola cytosol 70.09 70.09
CDX86100 Canola cytosol 66.67 69.93
Zm00001d009844_P001 Maize cytosol 73.52 69.82
CDY34395 Canola cytosol 69.78 69.78
CDX86799 Canola cytosol 68.85 69.06
CDY13242 Canola cytosol 68.54 68.75
GSMUA_Achr11P... Banana cytosol 74.14 67.42
CDX90793 Canola cytosol 67.6 67.39
CDY05136 Canola cytosol 67.29 67.08
CDY22350 Canola cytosol 69.16 67.07
CDY60901 Canola cytosol 68.85 66.77
TraesCS3A01G195500.1 Wheat cytosol 71.65 66.47
TraesCS3B01G226800.1 Wheat cytosol 71.65 65.71
HORVU3Hr1G044550.3 Barley cytosol 56.39 60.54
Zm00001d009181_P005 Maize cytosol 60.44 52.72
OQU77459 Sorghum cytosol 73.83 49.89
CDY38778 Canola cytosol 42.99 45.1
CDY11632 Canola cytosol 42.68 44.77
CDY07799 Canola cytosol 42.06 44.12
CDY34892 Canola cytosol 42.06 44.12
CDY47976 Canola cytosol 42.99 44.09
CDY51518 Canola cytosol 42.99 44.09
CDY55398 Canola cytosol 42.99 44.09
CDY14840 Canola cytosol 42.99 44.09
CDY69521 Canola cytosol 42.99 44.09
CDY52461 Canola cytosol 41.74 43.79
CDY30909 Canola cytosol 41.74 43.79
CDY45151 Canola cytosol 41.74 43.79
CDX93426 Canola cytosol 41.74 43.79
CDY37977 Canola cytosol 41.74 43.79
CDY66916 Canola cytosol 42.68 43.77
CDX92800 Canola cytosol 41.43 43.61
CDY46683 Canola cytosol 41.43 43.61
CDX71949 Canola cytosol 42.37 43.45
CDX98300 Canola cytosol 42.37 43.45
CDX88988 Canola cytosol 42.37 43.45
CDY00569 Canola cytosol 42.37 43.45
CDY06035 Canola cytosol 42.37 43.45
CDX89309 Canola cytosol 41.12 43.28
CDX94291 Canola cytosol 41.12 43.28
CDY24572 Canola cytosol 38.63 40.92
CDY25366 Canola cytosol 38.63 40.92
CDY70204 Canola cytosol 38.63 40.92
CDX82268 Canola cytosol 38.32 40.59
CDY33438 Canola cytosol 38.32 40.59
CDX67746 Canola cytosol 25.55 40.39
CDY69052 Canola cytosol 38.63 39.49
CDY03595 Canola cytosol 38.32 37.16
CDY36067 Canola plasma membrane 38.63 16.89
CDX89311 Canola cytosol, plastid 27.1 12.61
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.1.1Gene3D:3.60.21.10GO:A0A078GRC4UniProt:A0A078GRC4
EnsemblPlants:CDY27754ProteinID:CDY27754ProteinID:CDY27754.1InterPro:Calcineurin-like_PHP_ApaHGO:GO:0003674GO:GO:0003824
GO:GO:0004721GO:GO:0005488GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00038558001InterPro:IPR029052
InterPro:Metallo-depent_PP-likePFAM:PF00149PFAM:PF16891PRINTS:PR00114ScanProsite:PS00125PANTHER:PTHR11668
PANTHER:PTHR11668:SF262SMART:SM00156SUPFAM:SSF56300InterPro:STPPase_NInterPro:Ser/Thr-sp_prot-phosphataseUniParc:UPI0004EC2736
SEG:seg:::::
Description
BnaA05g31630DSerine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A078GRC4]
Coordinates
chrLK032209:+:249768..251633
Molecular Weight (calculated)
36421.0 Da
IEP (calculated)
5.113
GRAVY (calculated)
-0.179
Length
321 amino acids
Sequence
(BLAST)
001: MTTTMTTEGM MMEISMVDDI IRRLLEGKGG KQVQLSEIEI RQLCVNARQI FLSQPNLLDL HAPIRICGDI HGQYQDLLRL FEYGGYPPSA NYLFLGDYVD
101: RGKQSLETIC LLLAYKIRYP SKVFLLRGNH EDAKINRIYG FYDECKRRFN VRLWKVFTDC FNCLPVAALI DDKILCMHGG LSPELENLEQ IREIQRPTEI
201: PDNGLLCDLL WSDPDQKHEG WCDSDRGISC TFGADVVAEF LDKNDLDLIC RGHQVVEDGY EFFAKRRLVT IFSAPNYGGE FDNAGALLSV DQSLVCSFEI
301: LKPAPSSSSI PLKKVPKMGK S
Best Arabidopsis Sequence Match ( AT3G05580.1 )
(BLAST)
001: MMTSMEGMME MGVLDDIIRR LLEGKGGKQV QLSEVEIRQL CVNARQIFLS QPNLLELHAP IRICGDIHGQ YQDLLRLFEY GGYPPSANYL FLGDYVDRGK
101: QSLETICLLL AYKIRYPSKI FLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKIFTDCFNC LPVAALIDEK ILCMHGGLSP ELENLGQIRE IQRPTEIPDN
201: GLLCDLLWSD PDQKNEGWTD SDRGISCTFG ADVVADFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDQS LVCSFEILKP
301: APASSTNPLK KVPKMGKS
Arabidopsis Description
TOPP9Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VKY6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.