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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY10577 Canola cytosol 92.04 99.31
Bra005009.1-P Field mustard cytosol 91.4 98.97
CDY61002 Canola cytosol 96.5 95.28
CDY24946 Canola cytosol 96.18 94.97
AT2G39840.1 Thale cress cytosol 96.5 94.39
KRH73092 Soybean cytosol, nucleus 89.81 89.24
KRH15048 Soybean cytosol 89.49 89.21
Solyc06g030490.2.1 Tomato cytosol 85.03 87.83
PGSC0003DMT400017290 Potato cytosol 85.03 87.83
VIT_13s0019g02410.t01 Wine grape cytosol 87.26 87.54
Os03t0268000-01 Rice cytosol 87.9 85.71
TraesCS4A01G093600.1 Wheat cytosol 87.58 85.67
HORVU4Hr1G060490.1 Barley cytosol 87.58 85.67
TraesCS4D01G211500.1 Wheat cytosol 87.58 85.67
HORVU4Hr1G060530.1 Barley mitochondrion, peroxisome 84.71 85.53
TraesCS4B01G210800.1 Wheat cytosol 87.26 85.36
EER95117 Sorghum cytosol 85.99 83.85
GSMUA_Achr8P19510_001 Banana cytosol 74.2 83.51
CDY71651 Canola cytosol 58.6 83.26
Zm00001d047835_P003 Maize cytosol, extracellular, plasma membrane 84.39 82.04
CDX71136 Canola cytosol 80.25 81.55
CDX88683 Canola cytosol 80.25 81.55
CDY40180 Canola cytosol 81.53 80.76
CDY45437 Canola cytosol 81.53 80.25
CDX83308 Canola cytosol 81.21 80.19
CDY32662 Canola cytosol 79.3 79.81
CDX95749 Canola cytosol 80.89 79.38
CDX80301 Canola cytosol 77.07 79.08
CDY33013 Canola cytosol 77.07 79.08
CDY02866 Canola cytosol 79.62 77.4
CDX86100 Canola cytosol 73.25 75.16
CDY25556 Canola cytosol 76.43 74.77
CDY34395 Canola cytosol 76.11 74.45
CDX86799 Canola cytosol 75.16 73.75
CDY25019 Canola cytosol 74.2 73.27
CDY13242 Canola cytosol 74.52 73.12
CDX80617 Canola cytosol 74.2 73.04
CDY05560 Canola cytosol 73.89 72.96
CDY22350 Canola cytosol 76.43 72.51
CDY60901 Canola cytosol 76.11 72.21
CDY05182 Canola cytosol 73.57 71.96
CDY27754 Canola cytosol 73.57 71.96
CDX90793 Canola cytosol 73.25 71.43
CDY18815 Canola cytosol 72.29 71.38
CDX86135 Canola cytosol 57.64 71.26
CDY05136 Canola cytosol 72.61 70.81
Zm00001d028568_P004 Maize cytosol 85.99 65.85
CDY40717 Canola cytosol 72.93 62.91
CDX74139 Canola cytosol 72.61 60.64
CDY38778 Canola cytosol 44.9 46.08
CDY11632 Canola cytosol 44.9 46.08
CDY34892 Canola cytosol 44.27 45.42
CDY07799 Canola cytosol 44.27 45.42
CDY52461 Canola cytosol 43.95 45.1
CDY30909 Canola cytosol 43.31 44.44
CDX93426 Canola cytosol 42.99 44.12
CDY45151 Canola cytosol 42.99 44.12
CDY37977 Canola cytosol 42.99 44.12
CDX94291 Canola cytosol 42.68 43.93
CDX92800 Canola cytosol 42.68 43.93
CDX89309 Canola cytosol 42.68 43.93
CDY46683 Canola cytosol 42.68 43.93
CDY55398 Canola cytosol 42.68 42.81
CDY69521 Canola cytosol 42.68 42.81
CDY51518 Canola cytosol 42.68 42.81
CDY66916 Canola cytosol 42.36 42.49
CDY47976 Canola cytosol 42.36 42.49
CDY14840 Canola cytosol 42.36 42.49
CDX71949 Canola cytosol 42.04 42.17
CDY06035 Canola cytosol 42.04 42.17
CDX88988 Canola cytosol 42.04 42.17
CDY00569 Canola cytosol 42.04 42.17
CDX98300 Canola cytosol 42.04 42.17
CDY70204 Canola cytosol 39.49 40.92
CDY24572 Canola cytosol 39.17 40.59
CDX82268 Canola cytosol 39.17 40.59
CDY25366 Canola cytosol 39.17 40.59
CDY33438 Canola cytosol 39.17 40.59
CDX67746 Canola cytosol 25.16 38.92
CDY69052 Canola cytosol 38.85 38.85
CDY03595 Canola cytosol 38.53 36.56
CDY36067 Canola plasma membrane 39.81 17.03
CDX89311 Canola cytosol, plastid 27.07 12.32
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.1.1Gene3D:3.60.21.10GO:A0A078G1S9UniProt:A0A078G1S9
EnsemblPlants:CDY20490ProteinID:CDY20490ProteinID:CDY20490.1InterPro:Calcineurin-like_PHP_ApaHGO:GO:0003674GO:GO:0003824
GO:GO:0004721GO:GO:0005488GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00012589001InterPro:IPR029052
InterPro:Metallo-depent_PP-likePFAM:PF00149PFAM:PF16891PRINTS:PR00114ScanProsite:PS00125PANTHER:PTHR11668
PANTHER:PTHR11668:SF403SMART:SM00156SUPFAM:SSF56300InterPro:STPPase_NInterPro:Ser/Thr-sp_prot-phosphataseUniParc:UPI0004EDFC83
Description
BnaC04g05540DSerine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A078G1S9]
Coordinates
chrLK032108:+:467005..469194
Molecular Weight (calculated)
35628.0 Da
IEP (calculated)
5.093
GRAVY (calculated)
-0.142
Length
314 amino acids
Sequence
(BLAST)
001: MATTAIESAV LDDIIRRLTE VRLARPGKQV QLSEAEIKQL CTTARDIFLQ QPNLLELEAP IKICGDIHGQ YSDLLRLFEY GGFPPNANYL FLGDYVDRGK
101: QSLETICLLL AYKIKYPGNF FLLRGNHECA SINRIYGFYD ECKRRFNVRV WKVFTDCFNC LPVAALIDDK ILCMHGGLSP ELNHLDEVRS LPRPTMIPDT
201: GLLCDLLWSD PGTDVKGWGM NDRGVSYTFG PDKVSEFLEK HDLDLVCRAH QVVEDGYEFF ADRQLVTVFS APNYCGEFDN AGAMMSVDEN LMCSFQVLKP
301: AEKKSNKFMM STKI
Best Arabidopsis Sequence Match ( AT2G39840.1 )
(BLAST)
001: MATTTTTQGQ QTAIDSAVLD DIIRRLTEVR LARPGKQVQL SEAEIKQLCT TARDIFLQQP NLLELEAPIK ICGDIHGQYS DLLRLFEYGG FPPSANYLFL
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I
Arabidopsis Description
TOPP4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VUA1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.