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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX67659
CDX72108
CDX76014
CDX89437
CDY03368
CDY27189
CDY47381
CDY51261

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G50370.1 CDX67659 AT3G56850.1 23404889
AT1G50370.1 CDX72108 AT3G56850.1 23404889
AT1G50370.1 CDX76014 AT3G56850.1 23404889
AT1G50370.1 CDY27189 AT3G56850.1 23404889
AT1G50370.1 CDY47381 AT3G56850.1 23404889
AT1G50370.1 CDY51261 AT3G56850.1 23404889
AT1G50370.1 CDX89437 AT4G25200.1 21798944
AT1G50370.1 CDY03368 AT4G25200.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G50370.1 Thale cress cytosol 93.63 97.03
CDY25366 Canola cytosol 92.68 96.04
KRH36174 Soybean cytosol, nucleus 92.68 96.04
VIT_10s0071g00950.t01 Wine grape cytosol 92.36 95.71
CDY33438 Canola cytosol 92.36 95.71
KRG90576 Soybean cytosol, nucleus 92.36 95.71
KRH36176 Soybean cytosol 92.36 95.71
CDY24572 Canola cytosol 92.04 95.38
CDY70204 Canola cytosol 92.04 95.38
Solyc06g072140.2.1 Tomato cytosol 91.72 95.05
PGSC0003DMT400039336 Potato cytosol 91.72 95.05
CDX82268 Canola cytosol 91.4 94.72
Solyc03g019900.2.1 Tomato cytosol 91.4 94.72
GSMUA_AchrUn_... Banana cytosol 91.08 94.39
CDY03595 Canola cytosol 99.04 93.96
GSMUA_Achr9P21520_001 Banana cytosol 90.13 93.71
HORVU3Hr1G064290.2 Barley cytosol 89.81 93.07
TraesCS3A01G261200.1 Wheat cytosol 89.81 93.07
TraesCS3B01G294200.1 Wheat cytosol, golgi, plastid 89.81 93.07
TraesCS3D01G261300.1 Wheat cytosol 89.81 93.07
Os01t0691700-01 Rice cytosol, plasma membrane 89.49 92.74
EES01303 Sorghum cytosol 88.53 91.75
Zm00001d011634_P003 Maize cytosol 88.53 91.75
TraesCS1D01G380200.1 Wheat cytosol 87.9 91.09
Bra014246.1-P Field mustard cytosol 97.13 87.9
KRH40922 Soybean cytosol 84.39 86.32
TraesCS1B01G393500.1 Wheat cytosol 83.76 86.23
PGSC0003DMT400069607 Potato cytosol 91.4 85.67
HORVU1Hr1G083000.1 Barley cytosol 88.22 77.59
TraesCS1A01G373300.1 Wheat cytosol 87.26 76.54
CDY46683 Canola cytosol 57.64 59.34
CDX92800 Canola cytosol 57.64 59.34
CDX94291 Canola cytosol 57.32 59.02
CDX89309 Canola cytosol 57.32 59.02
CDY37977 Canola cytosol 55.1 56.54
CDX93426 Canola cytosol 55.1 56.54
CDY07799 Canola cytosol 54.46 55.88
CDY34892 Canola cytosol 54.46 55.88
CDY52461 Canola cytosol 54.46 55.88
CDY11632 Canola cytosol 54.14 55.56
CDY38778 Canola cytosol 54.14 55.56
CDY14840 Canola cytosol 55.1 55.27
CDY00569 Canola cytosol 55.1 55.27
CDY47976 Canola cytosol 55.1 55.27
CDY45151 Canola cytosol 53.82 55.23
CDY30909 Canola cytosol 53.82 55.23
CDX98300 Canola cytosol 54.78 54.95
CDX88988 Canola cytosol 54.78 54.95
CDY06035 Canola cytosol 54.78 54.95
CDX71949 Canola cytosol 54.78 54.95
CDY66916 Canola cytosol 54.46 54.63
CDY55398 Canola cytosol 54.46 54.63
CDY51518 Canola cytosol 54.46 54.63
CDY69521 Canola cytosol 54.46 54.63
CDX67746 Canola cytosol 31.53 48.77
CDY71651 Canola cytosol 30.57 43.44
CDX86135 Canola cytosol 33.44 41.34
CDX71136 Canola cytosol 39.49 40.13
CDX83308 Canola cytosol 40.45 39.94
CDY18815 Canola cytosol 40.13 39.62
CDX80617 Canola cytosol 40.13 39.5
CDX88683 Canola cytosol 38.85 39.48
CDX95749 Canola cytosol 40.13 39.38
CDY05560 Canola cytosol 39.81 39.31
CDY33013 Canola cytosol 38.22 39.22
CDX80301 Canola cytosol 38.22 39.22
CDY32662 Canola cytosol 38.85 39.1
CDY36067 Canola plasma membrane 91.4 39.1
CDY24946 Canola cytosol 39.49 38.99
CDY25019 Canola cytosol 39.49 38.99
CDY61002 Canola cytosol 39.49 38.99
CDY20490 Canola cytosol 38.85 38.85
CDX90793 Canola cytosol 39.81 38.82
CDY13242 Canola cytosol 39.49 38.75
CDX86799 Canola cytosol 39.49 38.75
CDY05182 Canola cytosol 39.49 38.63
CDY27754 Canola cytosol 39.49 38.63
CDY10577 Canola cytosol 35.67 38.49
CDY45437 Canola cytosol 38.85 38.24
CDY05136 Canola cytosol 39.17 38.2
CDY40180 Canola cytosol 38.53 38.17
CDX86100 Canola cytosol 36.94 37.91
CDY02866 Canola cytosol 38.85 37.77
CDY22350 Canola cytosol 39.81 37.76
CDY25556 Canola cytosol 38.53 37.69
CDY34395 Canola cytosol 38.53 37.69
CDY60901 Canola cytosol 39.17 37.16
CDY40717 Canola cytosol 39.49 34.07
CDX74139 Canola cytosol 40.13 33.51
CDX89311 Canola cytosol, plastid 21.02 9.57
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.1.5Gene3D:3.60.21.10GO:A0A078JU72UniProt:A0A078JU72
EnsemblPlants:CDY69052ProteinID:CDY69052ProteinID:CDY69052.1InterPro:Calcineurin-like_PHP_ApaHGO:GO:0003674GO:GO:0003824
GO:GO:0004721GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016787GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00082596001InterPro:IPR029052InterPro:Metallo-depent_PP-likePFAM:PF00149
PRINTS:PR00114ScanProsite:PS00125PANTHER:PTHR11668PANTHER:PTHR11668:SF24SMART:SM00156SUPFAM:SSF56300
InterPro:Ser/Thr-sp_prot-phosphataseUniParc:UPI0004EE068A::::
Description
BnaCnng61610DSerine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A078JU72]
Coordinates
chrLK038530:+:31..2874
Molecular Weight (calculated)
36079.9 Da
IEP (calculated)
4.854
GRAVY (calculated)
-0.237
Length
314 amino acids
Sequence
(BLAST)
001: MDLDQWISKV KDGQHLSEDE LHLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPD TNYIFMGDFV DRGYNSLEVF TILLLLKSRY
101: PAHITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIDRNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINNLELV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASML SFNDNMAIAP FVRQVVLERD VKFFTETEEN
301: NQMRGPRTGV PYFL
Best Arabidopsis Sequence Match ( AT1G50370.1 )
(BLAST)
001: MDLDQWISKV KDGQHLSEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPE TNYIFMGDFV DRGYNSLEVF TILLLLKARH
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINNLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL
Arabidopsis Description
FYPP1Phytochrome-associated serine/threonine-protein phosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX52]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.