Factsheet for VIT_10s0071g00950.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_16s0022g00510.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50370.1	VIT_16s0022g00510.t01	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90576	Soybean	cytosol, nucleus	99.34	99.34
KRH36174	Soybean	cytosol, nucleus	99.01	99.01
KRH36176	Soybean	cytosol	98.68	98.68
AT1G50370.1	Thale cress	cytosol	98.02	98.02
AT3G19980.1	Thale cress	cytosol	97.69	97.69
Solyc06g072140.2.1	Tomato	cytosol	97.69	97.69
PGSC0003DMT400039336	Potato	cytosol	97.69	97.69
Solyc03g019900.2.1	Tomato	cytosol	97.36	97.36
GSMUA_AchrUn_...	Banana	cytosol	97.36	97.36
GSMUA_Achr9P21520_001	Banana	cytosol	96.04	96.36
CDY25366	Canola	cytosol	95.38	95.38
Bra038247.1-P	Field mustard	cytosol	95.05	95.05
CDY33438	Canola	cytosol	95.05	95.05
CDY70204	Canola	cytosol	95.05	95.05
Os01t0691700-01	Rice	cytosol, plasma membrane	94.72	94.72
CDY24572	Canola	cytosol	94.72	94.72
CDX82268	Canola	cytosol	94.39	94.39
Bra001770.1-P	Field mustard	cytosol	94.39	94.39
TraesCS3D01G261300.1	Wheat	cytosol	94.06	94.06
TraesCS3B01G294200.1	Wheat	cytosol, golgi, plastid	94.06	94.06
HORVU3Hr1G064290.2	Barley	cytosol	94.06	94.06
TraesCS3A01G261200.1	Wheat	cytosol	94.06	94.06
Bra027930.1-P	Field mustard	cytosol	57.76	93.58
Zm00001d011634_P003	Maize	cytosol	92.41	92.41
EES01303	Sorghum	cytosol	92.41	92.41
CDY69052	Canola	cytosol	95.71	92.36
TraesCS1D01G380200.1	Wheat	cytosol	90.76	90.76
KRH40922	Soybean	cytosol	90.76	89.58
PGSC0003DMT400069607	Potato	cytosol	98.02	88.66
CDY03595	Canola	cytosol	95.71	87.61
TraesCS1B01G393500.1	Wheat	cytosol	86.47	85.9
Bra035830.1-P	Field mustard	cytosol	94.72	85.16
Bra014246.1-P	Field mustard	cytosol	96.04	83.86
HORVU1Hr1G083000.1	Barley	cytosol	91.09	77.31
TraesCS1A01G373300.1	Wheat	cytosol	90.1	76.26
VIT_19s0090g01290.t01	Wine grape	cytosol	60.07	59.67
VIT_17s0000g05330.t01	Wine grape	cytosol	57.76	57.19
VIT_01s0026g01080.t01	Wine grape	cytosol	56.77	56.21
VIT_14s0066g02240.t01	Wine grape	cytosol	56.11	55.56
VIT_06s0004g00830.t01	Wine grape	cytosol	56.77	54.78
VIT_13s0156g00060.t01	Wine grape	cytosol	56.77	43.22
VIT_13s0019g02410.t01	Wine grape	cytosol	42.57	41.21
VIT_06s0004g05530.t01	Wine grape	cytosol	40.92	41.2
VIT_08s0056g00220.t01	Wine grape	cytosol	38.94	39.73
CDY36067	Canola	plasma membrane	94.39	38.96
VIT_05s0049g00890.t01	Wine grape	cytosol	40.92	38.04
VIT_02s0025g00480.t01	Wine grape	cytosol	39.27	37.3
VIT_14s0060g01750.t01	Wine grape	cytosol	39.6	36.92
VIT_14s0036g00370.t01	Wine grape	cytosol	40.92	34.16

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100852922	wikigene:100852922	MapMan:18.4.24.1.5	Gene3D:3.60.21.10
ProteinID:CBI35355	ProteinID:CBI35355.3	InterPro:Calcineurin-like_PHP_ApaH	UniProt:D7TXY0	EMBL:FN596260	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029052	EntrezGene:LOC100852922	wikigene:LOC100852922
InterPro:Metallo-depent_PP-like	PFAM:PF00149	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF400
SMART:SM00156	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase	TIGR:TC56411	TIGR:TC66368	UniParc:UPI00015CC54C
ArrayExpress:VIT_10s0071g00950	EnsemblPlantsGene:VIT_10s0071g00950	EnsemblPlants:VIT_10s0071g00950.t01	unigene:Vvi.8766	RefSeq:XP_003633064	RefSeq:XP_003633064.1
RefSeq:XP_010655968.1	:	:	:	:	:

Description

Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:D7TXY0]

Coordinates

chr10:-:17560267..17576560

Molecular Weight (calculated)

34873.4 Da

IEP (calculated)

4.647

GRAVY (calculated)

-0.272

Length

303 amino acids

Sequence
(BLAST)

001: MDLDQWISKV KEGQHLLEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPE TNYIFMGDFV DRGYNSLEVF TILLLLKARY
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRVIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTSE FNHINNLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNENMEREV KFFTETEENN QMRGPRTGVP
301: YFL

Best Arabidopsis Sequence Match ( AT1G50370.1 )
(BLAST)

001: MDLDQWISKV KDGQHLSEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPE TNYIFMGDFV DRGYNSLEVF TILLLLKARH
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINNLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL

Arabidopsis Description

FYPP1Phytochrome-associated serine/threonine-protein phosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX52]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.