Factsheet for VIT_08s0056g00220.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51761	Soybean	cytosol, nucleus	87.21	85.76
GSMUA_Achr4P09690_001	Banana	cytosol	85.86	82.79
GSMUA_Achr8P24570_001	Banana	cytosol	84.51	82.03
TraesCS6A01G404700.1	Wheat	cytosol	83.84	81.91
TraesCS6D01G388000.1	Wheat	cytosol	83.84	81.91
Os08t0455600-01	Rice	cytosol, plasma membrane	84.18	81.43
TraesCS6B01G449000.1	Wheat	cytosol	83.17	81.25
EES13960	Sorghum	cytosol	82.15	80.0
Zm00001d032076_P002	Maize	cytosol	81.82	79.93
VIT_06s0004g05530.t01	Wine grape	cytosol	79.12	78.07
VIT_02s0025g00480.t01	Wine grape	cytosol	80.13	74.61
VIT_13s0019g02410.t01	Wine grape	cytosol	77.44	73.48
VIT_05s0049g00890.t01	Wine grape	cytosol	78.45	71.47
VIT_14s0060g01750.t01	Wine grape	cytosol	74.75	68.31
HORVU6Hr1G092760.2	Barley	cytosol	68.35	64.86
VIT_14s0036g00370.t01	Wine grape	cytosol	79.12	64.74
VIT_19s0090g01290.t01	Wine grape	cytosol	45.12	43.93
VIT_14s0066g02240.t01	Wine grape	cytosol	45.12	43.79
VIT_17s0000g05330.t01	Wine grape	cytosol	44.78	43.46
VIT_01s0026g01080.t01	Wine grape	cytosol	44.44	43.14
VIT_06s0004g00830.t01	Wine grape	cytosol	45.12	42.68
VIT_10s0071g00950.t01	Wine grape	cytosol	39.73	38.94
VIT_13s0156g00060.t01	Wine grape	cytosol	44.78	33.42

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100263930	wikigene:100263930	MapMan:18.4.24.1.1	Gene3D:3.60.21.10
ProteinID:CAQ58626	ProteinID:CAQ58626.1	ProteinID:CCB55938	ProteinID:CCB55938.1	EMBL:CU914151	InterPro:Calcineurin-like_PHP_ApaH
UniProt:F6HMR3	EMBL:FN595995	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052	EntrezGene:LOC100263930	wikigene:LOC100263930	InterPro:Metallo-depent_PP-like
PFAM:PF00149	PFAM:PF16891	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF294
SMART:SM00156	SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI00015CC428	ArrayExpress:VIT_08s0056g00220
EnsemblPlantsGene:VIT_08s0056g00220	EnsemblPlants:VIT_08s0056g00220.t01	RefSeq:XP_002264806	RefSeq:XP_002264806.1	:	:

Description

Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:F6HMR3]

Coordinates

chr8:+:342174..344425

Molecular Weight (calculated)

33862.7 Da

IEP (calculated)

4.815

GRAVY (calculated)

-0.142

Length

297 amino acids

Sequence
(BLAST)

001: MEGLDGLIER LLEARKCRGK RIQMSESEIR QLCITAKDVF LSQPNLLELE APINVCGDIH GQYSDLLRLF EYGGFPPDSN YLLLGDYVDR GKQSIETISL
101: LLCYKIKYPD NFFLLRGNHE CASINRIYGF YDECKRRFSV RLWKIFTDCF NCLPVAAIIE NKILCMHGGL SPEIESLDQI RAIERPVDVP DQGLLCDLLW
201: ADPDRDIKGW GENDRGVSYT FGADKVAEFL KKHDLDLICR AHQVVEDGYE FFAERQLVTI FSAPNYCGEF NNAGALMSVD ASLLCSFQIL KPFKAKE

Best Arabidopsis Sequence Match ( AT2G29400.1 )
(BLAST)

001: MAEKPAQEQE QKRAMEPAVL DDIIRRLVEF RNTRPGSGKQ VHLSEGEIRQ LCAVSKEIFL QQPNLLELEA PIKICGDIHG QYSDLLRLFE YGGFPPEANY
101: LFLGDYVDRG KQSLETICLL LAYKIKYPEN FFLLRGNHES ASINRIYGFY DECKRRFNVR LWKIFTDCFN CLPVAALIDD RILCMHGGIS PELKSLDQIR
201: NIARPMDIPE SGLVCDLLWS DPSGDVGWGM NDRGVSYTFG ADKVAEFLEK HDMDLICRAH QVVEDGYEFF AERQLVTVFS APNYCGEFDN AGAMMSIDES
301: LMCSFQILKP SEKKSPFL

Arabidopsis Description

TOPP1Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VXL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.