Factsheet for VIT_06s0004g00830.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58904	Soybean	cytosol	96.18	97.11
KRH42814	Soybean	cytosol	96.18	97.11
GSMUA_Achr9P11070_001	Banana	cytosol	89.81	96.58
TraesCS5A01G455000.1	Wheat	cytosol	86.62	96.11
GSMUA_Achr4P28610_001	Banana	cytosol	95.86	95.86
Os03t0805300-01	Rice	plasma membrane	93.31	95.44
Zm00001d013047_P002	Maize	cytosol, plasma membrane	92.99	95.11
KXG37326	Sorghum	cytosol	92.99	95.11
Zm00001d034517_P001	Maize	cytosol, extracellular, mitochondrion	92.68	94.79
Solyc01g005950.2.1	Tomato	cytosol, extracellular	94.27	94.57
PGSC0003DMT400081973	Potato	cytosol	94.27	94.57
TraesCS5D01G465400.1	Wheat	golgi	92.04	94.14
GSMUA_Achr2P12450_001	Banana	cytosol	93.63	93.63
Solyc01g034020.2.1	Tomato	cytosol	90.45	92.81
HORVU5Hr1G074200.4	Barley	cytosol	90.13	92.18
TraesCS5B01G271300.1	Wheat	cytosol	90.13	92.18
TraesCS5A01G270900.1	Wheat	cytosol	89.81	91.86
Os03t0167700-01	Rice	cytosol	90.76	90.76
TraesCS4B01G283300.2	Wheat	cytosol	90.45	90.73
TraesCS4D01G282100.1	Wheat	cytosol	90.45	90.73
Zm00001d027826_P001	Maize	cytosol	90.13	90.42
Os10t0410600-02	Rice	cytosol, plasma membrane, plastid	89.49	89.49
TraesCS5D01G278600.1	Wheat	cytosol	84.39	89.23
EER94259	Sorghum	cytosol	89.49	89.21
GSMUA_Achr8P15360_001	Banana	cytosol	89.17	86.96
GSMUA_Achr4P22190_001	Banana	cytosol	70.38	86.67
HORVU5Hr1G109430.2	Barley	cytosol, plastid	92.36	85.29
TraesCS5B01G464000.1	Wheat	endoplasmic reticulum, plasma membrane	87.58	84.62
Zm00001d048336_P003	Maize	cytosol	90.13	83.48
TraesCS4A01G020400.1	Wheat	cytosol	83.76	81.93
VIT_14s0066g02240.t01	Wine grape	cytosol	78.03	80.07
VIT_01s0026g01080.t01	Wine grape	cytosol	78.03	80.07
VIT_17s0000g05330.t01	Wine grape	cytosol	77.39	79.41
VIT_13s0156g00060.t01	Wine grape	cytosol	96.5	76.13
EER95434	Sorghum	plastid	90.45	73.77
Zm00001d032989_P003	Maize	cytosol	89.81	72.87
HORVU4Hr1G074680.4	Barley	cytosol, plastid	90.45	69.27
VIT_19s0090g01290.t01	Wine grape	cytosol	63.06	64.92
VIT_10s0071g00950.t01	Wine grape	cytosol	54.78	56.77
VIT_08s0056g00220.t01	Wine grape	cytosol	42.68	45.12
VIT_06s0004g05530.t01	Wine grape	cytosol	42.68	44.52
VIT_13s0019g02410.t01	Wine grape	cytosol	43.31	43.45
VIT_02s0025g00480.t01	Wine grape	cytosol	43.63	42.95
VIT_05s0049g00890.t01	Wine grape	cytosol	44.27	42.64
VIT_14s0060g01750.t01	Wine grape	cytosol	43.31	41.85
VIT_14s0036g00370.t01	Wine grape	cytosol	44.27	38.29

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100262164	wikigene:100262164	EntrezGene:100264866	wikigene:100264866
MapMan:13.4.1.2.3	MapMan:18.4.24.1.2.5	Gene3D:3.60.21.10	UniProt:A5AT05	EMBL:AM434461	ProteinID:CAN78260
ProteinID:CAN78260.1	ProteinID:CBI16499	ProteinID:CBI16499.3	InterPro:Calcineurin-like_PHP_ApaH	EMBL:FN594951	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029052	EntrezGene:LOC100262164	wikigene:LOC100262164
EntrezGene:LOC100264866	wikigene:LOC100264866	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PRINTS:PR00114	ScanProsite:PS00125
PANTHER:PTHR11668	PANTHER:PTHR11668:SF318	SMART:SM00156	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase	TIGR:TC62738
UniParc:UPI000151F63A	ArrayExpress:VIT_06s0004g00830	EnsemblPlantsGene:VIT_06s0004g00830	EnsemblPlants:VIT_06s0004g00830.t01	unigene:Vvi.24699	RefSeq:XP_002270378
RefSeq:XP_002270378.1	RefSeq:XP_002285694	RefSeq:XP_002285694.1	:	:	:

Description

Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A5AT05]

Coordinates

chr6:-:944151..953213

Molecular Weight (calculated)

35970.7 Da

IEP (calculated)

4.971

GRAVY (calculated)

-0.394

Length

314 amino acids

Sequence
(BLAST)

001: MSFDPVPSSN NHGNLDEQIS QLMQCKPLSE QEVRMLCEKA KEILMEESNV QPVKSPVTIC GDIHGQFHDL AELFRIGGKC PDTNYLFMGD YVDRGYYSVE
101: TVTLLVALKV RYPQRITILR GNHESRQITQ VYGFYDECLR KYGNANVWKI FTDLFDYFPL TALVESEIFC LHGGLSPSIE TLDNIRNFDR VQEVPHEGPM
201: CDLLWSDPDD RCGWGISPRG AGYTFGQDIS EQFNHTNNLK LIARAHQLVM EGFNWGHEQK VVTIFSAPNY CYRCGNMASI LEVDDCKGHT FIQFEPAPRR
301: GEPDVTRRTP DYFL

Best Arabidopsis Sequence Match ( AT3G58500.1 )
(BLAST)

001: MGANSLPTDA TLDLDEQISQ LMQCKPLSEQ QVRALCEKAK EILMDESNVQ PVKSPVTICG DIHGQFHDLA ELFRIGGKCP DTNYLFMGDY VDRGYYSVET
101: VTLLVGLKVR YPQRITILRG NHESRQITQV YGFYDECLRK YGNANVWKIF TDLFDYFPLT ALVESEIFCL HGGLSPSIET LDNIRNFDRV QEVPHEGPMC
201: DLLWSDPDDR CGWGISPRGA GYTFGQDISE QFNHTNNLKL IARAHQLVMD GFNWAHEQKV VTIFSAPNYC YRCGNMASIL EVDDCRNHTF IQFEPAPRRG
301: EPDVTRRTPD YFL

Arabidopsis Description

PP2A4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VCH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.