Factsheet for Zm00001d034517_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013047_P002	Maize	cytosol, plasma membrane	99.67	99.67
KXG37326	Sorghum	cytosol	99.67	99.67
Os03t0805300-01	Rice	plasma membrane	99.02	99.02
TraesCS5A01G455000.1	Wheat	cytosol	90.55	98.23
TraesCS5D01G465400.1	Wheat	golgi	98.05	98.05
GSMUA_Achr9P11070_001	Banana	cytosol	89.58	94.18
VIT_06s0004g00830.t01	Wine grape	cytosol	94.79	92.68
AT3G58500.1	Thale cress	cytosol	93.81	92.01
Bra003340.1-P	Field mustard	cytosol	93.16	91.96
CDX71949	Canola	cytosol	93.49	91.69
KRG96343	Soybean	cytosol	93.49	91.69
Bra014569.1-P	Field mustard	cytosol	93.49	91.69
Bra007398.1-P	Field mustard	cytosol	93.49	91.69
PGSC0003DMT400081973	Potato	cytosol	93.49	91.69
Solyc01g005950.2.1	Tomato	cytosol, extracellular	93.49	91.69
CDY06035	Canola	cytosol	93.49	91.69
CDX88988	Canola	cytosol	93.49	91.69
Solyc01g073650.2.1	Tomato	cytosol	93.16	91.67
PGSC0003DMT400079934	Potato	cytosol	93.16	91.67
CDY51518	Canola	cytosol	93.16	91.37
CDY55398	Canola	cytosol	93.16	91.37
CDY00569	Canola	cytosol	93.16	91.37
CDX98300	Canola	cytosol	93.16	91.37
KRH68078	Soybean	cytosol	93.16	91.37
KRH58904	Soybean	cytosol	92.51	91.32
KRH42814	Soybean	cytosol	92.51	91.32
Solyc01g034020.2.1	Tomato	cytosol	90.88	91.18
GSMUA_Achr4P28610_001	Banana	cytosol	93.16	91.08
GSMUA_Achr2P12450_001	Banana	cytosol	93.16	91.08
AT2G42500.1	Thale cress	cytosol	92.83	91.05
CDX67746	Canola	cytosol	59.93	90.64
Zm00001d027826_P001	Maize	cytosol	92.18	90.42
KRH71796	Soybean	cytosol	92.18	90.13
KRH38026	Soybean	cytosol	92.18	90.13
CDY69521	Canola	cytosol	91.86	90.1
CDY66916	Canola	cytosol	91.86	90.1
Bra016870.1-P	Field mustard	cytosol	91.53	89.78
CDY47976	Canola	cytosol	91.53	89.78
CDY14840	Canola	cytosol	91.53	89.78
HORVU5Hr1G109430.2	Barley	cytosol, plastid	98.37	88.82
TraesCS5B01G464000.1	Wheat	endoplasmic reticulum, plasma membrane	91.53	86.46
GSMUA_Achr4P22190_001	Banana	cytosol	70.03	84.31
Zm00001d048336_P003	Maize	cytosol	92.18	83.48
GSMUA_Achr8P15360_001	Banana	cytosol	86.64	82.61
Bra000262.1-P	Field mustard	cytosol	85.99	80.24
Bra004705.1-P	Field mustard	cytosol	87.95	80.12
Zm00001d046369_P002	Maize	cytosol	78.5	78.76
VIT_13s0156g00060.t01	Wine grape	cytosol	94.14	72.61
Zm00001d032989_P003	Maize	cytosol	91.53	72.61
Zm00001d016378_P002	Maize	cytosol	79.15	71.89
Zm00001d036949_P007	Maize	cytosol	69.71	69.48
Zm00001d005110_P001	Maize	cytosol	51.79	64.11
Zm00001d011634_P003	Maize	cytosol	55.37	56.11
Zm00001d053589_P001	Maize	cytosol	55.05	53.65
Zm00001d051898_P001	Maize	cytosol	38.11	46.25
Zm00001d018503_P002	Maize	cytosol	38.11	43.98
Zm00001d032076_P002	Maize	cytosol	43.32	43.75
Zm00001d047835_P003	Maize	cytosol, extracellular, plasma membrane	43.65	41.49
Zm00001d036285_P001	Maize	cytosol, extracellular	43.0	40.74
Zm00001d037601_P001	Maize	cytosol	39.74	40.67
Zm00001d009844_P001	Maize	cytosol	44.3	40.24
Zm00001d045213_P004	Maize	cytosol	42.02	39.81
Zm00001d028568_P004	Maize	cytosol	44.63	33.41
Zm00001d009181_P005	Maize	cytosol	38.44	32.07
Zm00001d053539_P001	Maize	cytosol	28.99	31.56
Zm00001d046377_P001	Maize	mitochondrion	22.8	22.65

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100381284	MapMan:13.4.1.2.3	MapMan:18.4.24.1.2.5	Gene3D:3.60.21.10
UniProt:B4G1M9	EMBL:BT043267	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	ProteinID:ONM10476.1	PFAM:PF00149	PRINTS:PR00114
ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF388	SMART:SM00156	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase
UniParc:UPI00017B7764	EnsemblPlantsGene:Zm00001d034517	EnsemblPlants:Zm00001d034517_P001	EnsemblPlants:Zm00001d034517_T001	:	:

Description

Serine/threonine-protein phosphatase

Coordinates

chr1:+:295585610..295590106

Molecular Weight (calculated)

35207.7 Da

IEP (calculated)

4.984

GRAVY (calculated)

-0.394

Length

307 amino acids

Sequence
(BLAST)

001: MSSPHGGLDD QIERLMQCKP LAEPEVRALC EKAKEILMEE SNVQPVKSPV TICGDIHGQF HDLAELFRIG GKCPDTNYLF MGDYVDRGYY SVETVTLLVS
101: LKVRYPQRIT ILRGNHESRQ ITQVYGFYDE CLRKYGNANV WKTFTDLFDY FPLTALVESE IFCLHGGLSP SIETLDNIRN FDRVQEVPHE GPMCDLLWSD
201: PDDRCGWGIS PRGAGYTFGQ DISEQFNHTN SLRLIARAHQ LVMEGFNWAH EQKVVTIFSA PNYCYRCGNM ASILEVDDCR EHTFIQFEPA PRRGEPDVTR
301: RTPDYFL

Best Arabidopsis Sequence Match ( AT3G58500.1 )
(BLAST)

001: MGANSLPTDA TLDLDEQISQ LMQCKPLSEQ QVRALCEKAK EILMDESNVQ PVKSPVTICG DIHGQFHDLA ELFRIGGKCP DTNYLFMGDY VDRGYYSVET
101: VTLLVGLKVR YPQRITILRG NHESRQITQV YGFYDECLRK YGNANVWKIF TDLFDYFPLT ALVESEIFCL HGGLSPSIET LDNIRNFDRV QEVPHEGPMC
201: DLLWSDPDDR CGWGISPRGA GYTFGQDISE QFNHTNNLKL IARAHQLVMD GFNWAHEQKV VTIFSAPNYC YRCGNMASIL EVDDCRNHTF IQFEPAPRRG
301: EPDVTRRTPD YFL

Arabidopsis Description

PP2A4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VCH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.