Factsheet for Solyc01g005950.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400081973	Potato	cytosol	99.36	99.36
TraesCS5A01G455000.1	Wheat	cytosol	85.3	94.35
VIT_06s0004g00830.t01	Wine grape	cytosol	94.57	94.27
KRH58904	Soybean	cytosol	93.29	93.89
KRH42814	Soybean	cytosol	93.29	93.89
KXG37326	Sorghum	cytosol	92.01	93.81
Zm00001d013047_P002	Maize	cytosol, plasma membrane	92.01	93.81
Os03t0805300-01	Rice	plasma membrane	92.01	93.81
Zm00001d034517_P001	Maize	cytosol, extracellular, mitochondrion	91.69	93.49
Solyc01g034020.2.1	Tomato	cytosol	91.05	93.14
GSMUA_Achr4P28610_001	Banana	cytosol	93.29	92.99
GSMUA_Achr9P11070_001	Banana	cytosol	86.58	92.81
TraesCS5D01G465400.1	Wheat	golgi	90.73	92.51
GSMUA_Achr2P12450_001	Banana	cytosol	92.01	91.72
Solyc01g073650.2.1	Tomato	cytosol	91.37	91.67
HORVU5Hr1G074200.4	Barley	cytosol	89.46	91.21
TraesCS5B01G271300.1	Wheat	cytosol	89.14	90.88
TraesCS5A01G270900.1	Wheat	cytosol	89.14	90.88
TraesCS4D01G282100.1	Wheat	cytosol	89.78	89.78
Zm00001d027826_P001	Maize	cytosol	89.78	89.78
TraesCS4B01G283300.2	Wheat	cytosol	89.78	89.78
Os03t0167700-01	Rice	cytosol	89.78	89.49
TraesCS5D01G278600.1	Wheat	cytosol	83.71	88.22
Os10t0410600-02	Rice	cytosol, plasma membrane, plastid	88.18	87.9
EER94259	Sorghum	cytosol	88.18	87.62
GSMUA_Achr4P22190_001	Banana	cytosol	69.33	85.1
GSMUA_Achr8P15360_001	Banana	cytosol	86.26	83.85
HORVU5Hr1G109430.2	Barley	cytosol, plastid	91.05	83.82
TraesCS5B01G464000.1	Wheat	endoplasmic reticulum, plasma membrane	86.58	83.38
Zm00001d048336_P003	Maize	cytosol	89.78	82.89
TraesCS4A01G020400.1	Wheat	cytosol	83.07	81.0
Solyc01g011340.2.1	Tomato	cytosol, plastid	78.27	80.07
Solyc05g006590.2.1	Tomato	cytosol	77.96	79.74
EER95434	Sorghum	plastid	90.1	73.25
Zm00001d032989_P003	Maize	cytosol	88.5	71.58
HORVU4Hr1G074680.4	Barley	cytosol, plastid	89.78	68.54
Solyc07g065020.2.1	Tomato	cytosol	63.26	64.92
Solyc03g019900.2.1	Tomato	cytosol	53.67	55.45
Solyc06g072140.2.1	Tomato	cytosol	53.04	54.79
Solyc06g076430.2.1	Tomato	cytosol, nucleus	43.45	43.87
Solyc06g030490.2.1	Tomato	cytosol	42.49	43.75
Solyc01g099860.2.1	Tomato	cytosol, unclear	43.45	43.17
Solyc06g053630.2.1	Tomato	cytosol	44.09	42.86
Solyc06g005800.2.1	Tomato	cytosol, nucleus	43.13	42.32
Solyc05g055060.2.1	Tomato	cytosol, nucleus	43.77	42.15
Solyc09g090060.2.1	Tomato	cytosol	43.77	41.52

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:13.4.1.2.3	MapMan:18.4.24.1.2.5	Gene3D:3.60.21.10	InterPro:Calcineurin-like_PHP_ApaH
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029052	UniProt:K4ASG1
InterPro:Metallo-depent_PP-like	PFAM:PF00149	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF388
SMART:SM00156	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase	EnsemblPlantsGene:Solyc01g005950.2	EnsemblPlants:Solyc01g005950.2.1	UniParc:UPI0002761EBA

Description

Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:K4ASG1]

Coordinates

chr1:-:617606..624776

Molecular Weight (calculated)

35549.2 Da

IEP (calculated)

4.854

GRAVY (calculated)

-0.322

Length

313 amino acids

Sequence
(BLAST)

001: MSLDPVVSSS QGNLDEQIAQ LMQCKPLSEQ EVKGLCQKAK EILMDESNVM PVKSPVTICG DIHGQFHDLA ELFRIGGKCP DTNYLFMGDY VDRGYYSVET
101: VTLLVALKVR YPQRITILRG NHESRQITQV YGFYDECLRK YGNANVWKTF TDLFDYFPLT ALVESEIFCL HGGLSPSIET LDNIRNFDRV QEVPHEGAMC
201: DLLWSDPDDR CGWGISPRGA GYTFGQDISE QFNHTNGLKL IARAHQLVME GFNWAHDQKV VTIFSAPNYC YRCGNMASIL EVDDCNGHTF IQFEPAPRRG
301: EPDVTRRTPD YFL

Best Arabidopsis Sequence Match ( AT3G58500.1 )
(BLAST)

001: MGANSLPTDA TLDLDEQISQ LMQCKPLSEQ QVRALCEKAK EILMDESNVQ PVKSPVTICG DIHGQFHDLA ELFRIGGKCP DTNYLFMGDY VDRGYYSVET
101: VTLLVGLKVR YPQRITILRG NHESRQITQV YGFYDECLRK YGNANVWKIF TDLFDYFPLT ALVESEIFCL HGGLSPSIET LDNIRNFDRV QEVPHEGPMC
201: DLLWSDPDDR CGWGISPRGA GYTFGQDISE QFNHTNNLKL IARAHQLVMD GFNWAHEQKV VTIFSAPNYC YRCGNMASIL EVDDCRNHTF IQFEPAPRRG
301: EPDVTRRTPD YFL

Arabidopsis Description

PP2A4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VCH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.