Factsheet for VIT_13s0156g00060.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g00830.t01	Wine grape	cytosol	76.13	96.5
GSMUA_Achr9P11070_001	Banana	cytosol	70.6	96.23
TraesCS5A01G455000.1	Wheat	cytosol	68.34	96.11
Os03t0805300-01	Rice	plasma membrane	73.12	94.79
Zm00001d013047_P002	Maize	cytosol, plasma membrane	72.86	94.46
KXG37326	Sorghum	cytosol	72.86	94.46
GSMUA_Achr4P28610_001	Banana	cytosol	74.37	94.27
Zm00001d034517_P001	Maize	cytosol, extracellular, mitochondrion	72.61	94.14
TraesCS5D01G465400.1	Wheat	golgi	72.11	93.49
GSMUA_Achr2P12450_001	Banana	cytosol	73.12	92.68
Solyc01g073650.2.1	Tomato	cytosol	72.61	92.63
PGSC0003DMT400079934	Potato	cytosol	72.61	92.63
TraesCS5B01G271300.1	Wheat	cytosol	70.35	91.21
HORVU5Hr1G074200.4	Barley	cytosol	70.35	91.21
TraesCS5A01G270900.1	Wheat	cytosol	70.1	90.88
Zm00001d027826_P001	Maize	cytosol	71.11	90.42
TraesCS4B01G283300.2	Wheat	cytosol	71.11	90.42
TraesCS4D01G282100.1	Wheat	cytosol	71.11	90.42
Os10t0410600-02	Rice	cytosol, plasma membrane, plastid	71.11	90.13
Os03t0167700-01	Rice	cytosol	71.11	90.13
EER94259	Sorghum	cytosol	71.11	89.84
TraesCS5D01G278600.1	Wheat	cytosol	65.83	88.22
GSMUA_Achr4P22190_001	Banana	cytosol	55.53	86.67
GSMUA_Achr8P15360_001	Banana	cytosol	69.1	85.4
TraesCS5B01G464000.1	Wheat	endoplasmic reticulum, plasma membrane	69.35	84.92
HORVU5Hr1G109430.2	Barley	cytosol, plastid	72.36	84.71
Zm00001d048336_P003	Maize	cytosol	71.11	83.48
TraesCS4A01G020400.1	Wheat	cytosol	65.83	81.62
VIT_01s0026g01080.t01	Wine grape	cytosol	61.56	80.07
VIT_14s0066g02240.t01	Wine grape	cytosol	61.31	79.74
VIT_17s0000g05330.t01	Wine grape	cytosol	60.8	79.08
EER95434	Sorghum	plastid	71.36	73.77
Zm00001d032989_P003	Maize	cytosol	71.36	73.39
HORVU4Hr1G074680.4	Barley	cytosol, plastid	71.11	69.02
VIT_19s0090g01290.t01	Wine grape	cytosol	49.75	64.92
VIT_10s0071g00950.t01	Wine grape	cytosol	43.22	56.77
VIT_08s0056g00220.t01	Wine grape	cytosol	33.42	44.78
VIT_06s0004g05530.t01	Wine grape	cytosol	33.42	44.19
VIT_13s0019g02410.t01	Wine grape	cytosol	33.92	43.13
VIT_05s0049g00890.t01	Wine grape	cytosol	34.67	42.33
VIT_02s0025g00480.t01	Wine grape	cytosol	33.92	42.32
VIT_14s0060g01750.t01	Wine grape	cytosol	33.92	41.54
VIT_14s0036g00370.t01	Wine grape	cytosol	34.67	38.02

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.21.10	MapMan:50.3.1	ProteinID:CCB56676	ProteinID:CCB56676.1
InterPro:Calcineurin-like_PHP_ApaH	UniProt:F6HPS0	EMBL:FN596003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824
GO:GO:0004721	GO:GO:0005488	GO:GO:0006139	GO:GO:0006259	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015074	GO:GO:0016787	GO:GO:0019538
InterPro:IPR029052	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PIRSF:PIRSF033096	PRINTS:PR00114	ScanProsite:PS00125
PANTHER:PTHR11668	PANTHER:PTHR11668:SF318	SMART:SM00156	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase	TIGR:TC53528
UniParc:UPI0002108E43	ArrayExpress:VIT_13s0156g00060	EnsemblPlantsGene:VIT_13s0156g00060	EnsemblPlants:VIT_13s0156g00060.t01	:	:

Description

Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:F6HPS0]

Coordinates

chr13:-:23815345..23845613

Molecular Weight (calculated)

45533.0 Da

IEP (calculated)

5.724

GRAVY (calculated)

-0.410

Length

398 amino acids

Sequence
(BLAST)

001: MDLISSDSHG NLDAQISQLM QCKPLSEQEV RTLCEKAKEI LMEESNVQPV KSPVTICGDI HGQFHDLAEL FRIGGKCPDT NYLFMGDYVD RGYYSVETVT
101: MFVKSNKQDR VSKSPTKFEY RTMSLACSKI IWLRGLLAEL DFSETDPTPL HADNTSANQI TTNPVYHERT KHIEVDCHSI RAAFEARLLV ALKVRYPQRI
201: TILRGNHESR QITQVYGFYD ECLRKYGNAN VWKIFTDLFD YFPLTALVES EIFCLHGGLS PSIETLDNIR NFDRVQEVPH EGPMCDLLWS DPDDRCGWGI
301: SPRGAGYTFG QDISEQFNHT NNLKLIARAH QLVMEGFNWG HEQKVVTIFS APNYCYRCGN MASILEVDDC KGHTFIQFEP APRRGEPDVT RRTPDYFL

Best Arabidopsis Sequence Match ( AT3G58500.1 )
(BLAST)

001: MGANSLPTDA TLDLDEQISQ LMQCKPLSEQ QVRALCEKAK EILMDESNVQ PVKSPVTICG DIHGQFHDLA ELFRIGGKCP DTNYLFMGDY VDRGYYSVET
101: VTLLVGLKVR YPQRITILRG NHESRQITQV YGFYDECLRK YGNANVWKIF TDLFDYFPLT ALVESEIFCL HGGLSPSIET LDNIRNFDRV QEVPHEGPMC
201: DLLWSDPDDR CGWGISPRGA GYTFGQDISE QFNHTNNLKL IARAHQLVMD GFNWAHEQKV VTIFSAPNYC YRCGNMASIL EVDDCRNHTF IQFEPAPRRG
301: EPDVTRRTPD YFL

Arabidopsis Description

PP2A4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VCH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.