Factsheet for VIT_14s0036g00370.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97050	Soybean	cytosol	79.89	88.96
KRH68801	Soybean	cytosol, endoplasmic reticulum	78.51	88.24
KRG92623	Soybean	cytosol, endoplasmic reticulum	78.79	87.73
KRH34158	Soybean	cytosol, nucleus	78.24	87.12
Solyc05g055060.2.1	Tomato	cytosol, nucleus	77.96	87.08
VIT_06s0004g05530.t01	Wine grape	cytosol	71.9	86.71
VIT_05s0049g00890.t01	Wine grape	cytosol	77.14	85.89
GSMUA_Achr4P29300_001	Banana	cytosol	75.21	85.85
GSMUA_Achr4P25210_001	Banana	cytosol	75.21	85.58
VIT_13s0019g02410.t01	Wine grape	cytosol	73.0	84.66
GSMUA_Achr1P01390_001	Banana	cytosol	76.58	84.5
GSMUA_Achr11P...	Banana	cytosol	75.48	84.05
VIT_02s0025g00480.t01	Wine grape	cytosol	69.7	79.31
VIT_08s0056g00220.t01	Wine grape	cytosol	64.74	79.12
VIT_14s0060g01750.t01	Wine grape	cytosol	64.74	72.31
PGSC0003DMT400060162	Potato	cytosol	77.69	68.28
VIT_01s0026g01080.t01	Wine grape	cytosol	38.02	45.1
VIT_14s0066g02240.t01	Wine grape	cytosol	37.74	44.77
VIT_19s0090g01290.t01	Wine grape	cytosol	37.47	44.59
VIT_06s0004g00830.t01	Wine grape	cytosol	38.29	44.27
VIT_17s0000g05330.t01	Wine grape	cytosol	36.36	43.14
VIT_10s0071g00950.t01	Wine grape	cytosol	34.16	40.92
VIT_13s0156g00060.t01	Wine grape	cytosol	38.02	34.67

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100258649	wikigene:100258649	MapMan:18.4.24.1.1	Gene3D:3.60.21.10
EMBL:AM430578	ProteinID:CAN71489	ProteinID:CAN71489.1	ProteinID:CCB47665	ProteinID:CCB47665.1	InterPro:Calcineurin-like_PHP_ApaH
UniProt:F6H626	EMBL:FN595241	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052	EntrezGene:LOC100258649	wikigene:LOC100258649	InterPro:Metallo-depent_PP-like
PFAM:PF00149	PFAM:PF16891	PIRSF:PIRSF033096	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668
PANTHER:PTHR11668:SF390	SMART:SM00156	SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	TIGR:TC65065
UniParc:UPI0002108FF9	ArrayExpress:VIT_14s0036g00370	EnsemblPlantsGene:VIT_14s0036g00370	EnsemblPlants:VIT_14s0036g00370.t01	unigene:Vvi.753	RefSeq:XP_002265552
RefSeq:XP_002265552.2	SEG:seg	:	:	:	:

Description

Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:F6H626]

Coordinates

chr14:-:9875459..9896365

Molecular Weight (calculated)

41253.6 Da

IEP (calculated)

6.251

GRAVY (calculated)

-0.200

Length

363 amino acids

Sequence
(BLAST)

001: MDPSVLDDII NRLREVRLRP GKQVQLSESE IRQLCVVSRE IFLKQPNLLE LCAPIKICGD IHGQYSDLLR LFDYGGFPPQ ANYLFLGDYV DRGKQSLETI
101: CLLLAYKIRY PENFFLLRGN HECASINRIY GFYDECKRRF NVRLWKIFTD CFNCLPVAAR IDDKILCMHG GLSPDLHNLD QIRNLQRPTD VPDTGLLCDL
201: LWSDPSNDIQ GWGMNDRGVS YTFGPDKVTE FLEKHDLDLV CRAHQVVEDG YEFFANRQLV TIFSAPNYCG EFDNAGAMMS VDDTLMCSFQ ILKPAVKKLK
301: FSFGSTTTTK PGNSPEVFGS TTTTKPGNTP TGVKGIWVDK VPTKVVFFAW EATWGKVLTL DRL

Best Arabidopsis Sequence Match ( AT2G39840.1 )
(BLAST)

001: MATTTTTQGQ QTAIDSAVLD DIIRRLTEVR LARPGKQVQL SEAEIKQLCT TARDIFLQQP NLLELEAPIK ICGDIHGQYS DLLRLFEYGG FPPSANYLFL
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I

Arabidopsis Description

TOPP4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VUA1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.