Factsheet for VIT_05s0049g00890.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 4
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g053630.2.1	Tomato	cytosol	84.66	85.71
GSMUA_Achr4P29300_001	Banana	cytosol	82.82	84.91
GSMUA_Achr1P01390_001	Banana	cytosol	84.97	84.19
GSMUA_Achr11P...	Banana	cytosol	84.05	84.05
GSMUA_Achr4P25210_001	Banana	cytosol	82.21	84.01
PGSC0003DMT400044371	Potato	cytosol	84.66	83.64
VIT_06s0004g05530.t01	Wine grape	cytosol	76.99	83.39
Solyc09g090060.2.1	Tomato	cytosol	83.44	82.42
VIT_13s0019g02410.t01	Wine grape	cytosol	78.83	82.11
PGSC0003DMT400041996	Potato	cytosol	84.97	80.52
KRG92313	Soybean	cytosol, nucleus	81.29	80.3
KRH69127	Soybean	cytosol	77.91	79.62
VIT_02s0025g00480.t01	Wine grape	cytosol	76.99	78.68
VIT_08s0056g00220.t01	Wine grape	cytosol	71.47	78.45
VIT_14s0036g00370.t01	Wine grape	cytosol	85.89	77.14
KRH34478	Soybean	cytosol	80.37	75.94
KRH31706	Soybean	cytosol	78.53	75.74
VIT_14s0060g01750.t01	Wine grape	cytosol	70.86	71.08
VIT_19s0090g01290.t01	Wine grape	cytosol	42.33	45.25
VIT_01s0026g01080.t01	Wine grape	cytosol	41.72	44.44
VIT_06s0004g00830.t01	Wine grape	cytosol	42.64	44.27
VIT_14s0066g02240.t01	Wine grape	cytosol	41.41	44.12
VIT_17s0000g05330.t01	Wine grape	cytosol	41.41	44.12
VIT_10s0071g00950.t01	Wine grape	cytosol	38.04	40.92
VIT_13s0156g00060.t01	Wine grape	cytosol	42.33	34.67

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100240794	wikigene:100240794	MapMan:18.4.24.1.1	Gene3D:3.60.21.10
ProteinID:CBI23634	ProteinID:CBI23634.3	InterPro:Calcineurin-like_PHP_ApaH	UniProt:D7SZF7	EMBL:FN595496	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052
EntrezGene:LOC100240794	wikigene:LOC100240794	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PFAM:PF16891	PRINTS:PR00114
ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF390	SMART:SM00156	SUPFAM:SSF56300	InterPro:STPPase_N
InterPro:Ser/Thr-sp_prot-phosphatase	TIGR:TC65123	UniParc:UPI00019834AE	ArrayExpress:VIT_05s0049g00890	EnsemblPlantsGene:VIT_05s0049g00890	EnsemblPlants:VIT_05s0049g00890.t01
unigene:Vvi.11858	unigene:Vvi.25096	RefSeq:XP_002285139	RefSeq:XP_002285139.1	:	:

Description

Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:D7SZF7]

Coordinates

chr5:+:7894018..7899124

Molecular Weight (calculated)

36792.4 Da

IEP (calculated)

6.051

GRAVY (calculated)

-0.148

Length

326 amino acids

Sequence
(BLAST)

001: MEPAVLDDII ERLLAVKARP GKQVQLSEAE IRQLCVASKD IFLRQPNLLE LQAPVKICGD IHGQYSDLLR LFDYGGLPPE SNYLFLGDYV DRGKQSLETI
101: CLLLAYKIRY PENFFLLRGN HECASINRIY GFYDECKRRF NVRLWKVFTD CFNCLPVAAL IDEKILCMHG GLSPDLRSLD QIRNLQRPTD VPDAGLLCDL
201: LWSDPSNDVR GWGMNDRGVS YVFGPDKVTE LLQKHDLDLI CRAHQVVEDG YEFFANRQLV TIFSAPNYCG EFDNAGAMMS VDDTLMCSFQ VLKPAEKNKK
301: FSFGSTTTAK PGSCPARLKS ILGAKV

Best Arabidopsis Sequence Match ( AT2G39840.1 )
(BLAST)

001: MATTTTTQGQ QTAIDSAVLD DIIRRLTEVR LARPGKQVQL SEAEIKQLCT TARDIFLQQP NLLELEAPIK ICGDIHGQYS DLLRLFEYGG FPPSANYLFL
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I

Arabidopsis Description

TOPP4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VUA1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.