Factsheet for Zm00001d009844_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d010993_P001
Zm00001d037594_P001
Zm00001d046694_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G05580.1	Zm00001d010993_P001	AT5G52200.1	21798944
AT3G05580.1	Zm00001d037594_P001	AT5G52200.1	21798944
AT3G05580.1	Zm00001d046694_P001	AT5G52200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037601_P001	Maize	cytosol	86.39	97.33
HORVU1Hr1G022370.5	Barley	cytosol	87.87	91.1
TraesCS1A01G095500.1	Wheat	cytosol	87.57	91.08
TraesCS1B01G128100.1	Wheat	cytosol	87.57	91.08
TraesCS1D01G104400.1	Wheat	cytosol	87.28	90.77
GSMUA_Achr11P...	Banana	cytosol	73.08	78.16
GSMUA_Achr2P02240_001	Banana	cytosol	72.49	76.32
CDX86135	Canola	cytosol	56.8	75.59
Solyc01g099860.2.1	Tomato	cytosol, unclear	69.53	74.6
PGSC0003DMT400063710	Potato	cytosol	69.53	74.6
CDY05560	Canola	cytosol	70.12	74.53
CDY25019	Canola	cytosol	69.82	74.21
Bra001155.1-P	Field mustard	cytosol	69.82	74.21
Bra039424.1-P	Field mustard	cytosol	70.12	73.83
CDY18815	Canola	cytosol	69.23	73.58
Bra040535.1-P	Field mustard	cytosol	69.23	73.58
AT3G05580.1	Thale cress	cytosol	69.23	73.58
CDY27754	Canola	cytosol	69.82	73.52
CDY05182	Canola	cytosol	69.82	73.52
CDX80617	Canola	cytosol	69.23	73.35
Bra009941.1-P	Field mustard	cytosol	68.93	73.04
KRH68493	Soybean	cytosol	69.53	72.53
GSMUA_Achr8P06590_001	Banana	cytosol	60.06	72.5
VIT_14s0060g01750.t01	Wine grape	cytosol	67.75	70.46
Zm00001d032076_P002	Maize	cytosol	63.02	70.07
AT5G27840.4	Thale cress	cytosol	68.05	69.7
GSMUA_Achr11P...	Banana	cytosol	72.19	69.12
Bra020573.1-P	Field mustard	cytosol	69.53	68.31
Zm00001d045213_P004	Maize	cytosol	65.38	68.21
Zm00001d047835_P003	Maize	cytosol, extracellular, plasma membrane	65.09	68.11
Zm00001d051898_P001	Maize	cytosol	50.89	67.98
Zm00001d036285_P001	Maize	cytosol, extracellular	65.09	67.9
Zm00001d009181_P005	Maize	cytosol	71.6	65.76
CDY40717	Canola	cytosol	70.41	65.38
Zm00001d018503_P002	Maize	cytosol	51.18	65.04
CDX74139	Canola	cytosol	70.12	63.03
KRG96778	Soybean	nucleus	69.53	62.67
Zm00001d028568_P004	Maize	cytosol	65.68	54.15
Zm00001d053539_P001	Maize	cytosol	39.94	47.87
Zm00001d013047_P002	Maize	cytosol, plasma membrane	40.53	44.63
Zm00001d034517_P001	Maize	cytosol, extracellular, mitochondrion	40.24	44.3
Zm00001d046369_P002	Maize	cytosol	39.94	44.12
Zm00001d027826_P001	Maize	cytosol	39.94	43.13
Zm00001d005110_P001	Maize	cytosol	31.36	42.74
Zm00001d011634_P003	Maize	cytosol	37.28	41.58
Zm00001d016378_P002	Maize	cytosol	39.94	39.94
Zm00001d048336_P003	Maize	cytosol	39.65	39.53
Zm00001d036949_P007	Maize	cytosol	34.91	38.31
Zm00001d046377_P001	Maize	mitochondrion	31.95	34.95
Zm00001d032989_P003	Maize	cytosol	39.65	34.63
Zm00001d053589_P001	Maize	cytosol	31.36	33.65

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:103635487	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	UniProt:A0A1D6FMA8
ProteinID:AQK92801.1	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PFAM:PF16891
PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF305	SMART:SM00156	SUPFAM:SSF56300
InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI0008436157	EnsemblPlantsGene:Zm00001d009844	EnsemblPlants:Zm00001d009844_P001	EnsemblPlants:Zm00001d009844_T001
SEG:seg	:	:	:	:	:

Description

Serine/threonine-protein phosphatase

Coordinates

chr8:+:84731498..84734424

Molecular Weight (calculated)

38120.0 Da

IEP (calculated)

5.681

GRAVY (calculated)

-0.193

Length

338 amino acids

Sequence
(BLAST)

001: MMMTRAPMGP MEGAAVDEVV RRLVEGGRGG RQVQLSEAEI RQLCVDGKRV LLSQPNLLRI HAPVKICGDI HGQFVDLLRL FDLGGYPPAS TYVFLGDYVD
101: RGKQSLETIC LLLAYKIRYP EKIFLLRGNH EDAKINRVYG FYDECKRRFN VRLWKIFSDC FNCLPIAALI DDKILCMHGG LSPEWTSLDQ IKDIERPAEI
201: PDYGLLCDLL WSDPSPDGEG WGESDRGVSC TFGADKLVEF LEKNDLDLIC RAHQVVEDGY EFFAQRRLVT IFSAPNYCGE FDNAGALLSI DESLMCSFQI
301: LKPTDMGPPH ARKQIPNKVN QLPSHRNIGS MFSYKATS

Best Arabidopsis Sequence Match ( AT3G05580.1 )
(BLAST)

001: MMTSMEGMME MGVLDDIIRR LLEGKGGKQV QLSEVEIRQL CVNARQIFLS QPNLLELHAP IRICGDIHGQ YQDLLRLFEY GGYPPSANYL FLGDYVDRGK
101: QSLETICLLL AYKIRYPSKI FLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKIFTDCFNC LPVAALIDEK ILCMHGGLSP ELENLGQIRE IQRPTEIPDN
201: GLLCDLLWSD PDQKNEGWTD SDRGISCTFG ADVVADFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDQS LVCSFEILKP
301: APASSTNPLK KVPKMGKS

Arabidopsis Description

TOPP9Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VKY6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.