Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU4Hr1G011360.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G05580.1 | HORVU4Hr1G011360.1 | AT5G52200.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G095500.1 | Wheat | cytosol | 96.32 | 96.62 |
| TraesCS1D01G104400.1 | Wheat | cytosol | 96.01 | 96.31 |
| TraesCS1B01G128100.1 | Wheat | cytosol | 96.01 | 96.31 |
| Zm00001d037601_P001 | Maize | cytosol | 84.66 | 92.0 |
| Zm00001d009844_P001 | Maize | cytosol | 91.1 | 87.87 |
| GSMUA_Achr11P... | Banana | cytosol | 76.99 | 79.43 |
| GSMUA_Achr2P02240_001 | Banana | cytosol | 76.38 | 77.57 |
| HORVU3Hr1G044550.3 | Barley | cytosol | 70.25 | 76.59 |
| CDX86135 | Canola | cytosol | 57.98 | 74.41 |
| Solyc01g099860.2.1 | Tomato | cytosol, unclear | 71.78 | 74.29 |
| PGSC0003DMT400063710 | Potato | cytosol | 71.78 | 74.29 |
| Bra039424.1-P | Field mustard | cytosol | 72.7 | 73.83 |
| Bra001155.1-P | Field mustard | cytosol | 71.78 | 73.58 |
| CDY05560 | Canola | cytosol | 71.78 | 73.58 |
| CDY05182 | Canola | cytosol | 72.39 | 73.52 |
| CDY27754 | Canola | cytosol | 72.39 | 73.52 |
| AT3G05580.1 | Thale cress | cytosol | 71.47 | 73.27 |
| CDY25019 | Canola | cytosol | 71.47 | 73.27 |
| CDY18815 | Canola | cytosol | 71.17 | 72.96 |
| Bra040535.1-P | Field mustard | cytosol | 71.17 | 72.96 |
| GSMUA_Achr8P06590_001 | Banana | cytosol | 62.27 | 72.5 |
| CDX80617 | Canola | cytosol | 70.86 | 72.41 |
| KRH68493 | Soybean | cytosol | 71.78 | 72.22 |
| Bra009941.1-P | Field mustard | cytosol | 70.55 | 72.1 |
| VIT_14s0060g01750.t01 | Wine grape | cytosol | 70.25 | 70.46 |
| HORVU7Hr1G026400.1 | Barley | cytosol | 68.4 | 69.47 |
| HORVU4Hr1G060530.1 | Barley | mitochondrion, peroxisome | 65.95 | 69.13 |
| GSMUA_Achr11P... | Banana | cytosol | 74.85 | 69.12 |
| HORVU4Hr1G060490.1 | Barley | cytosol | 67.79 | 68.85 |
| AT5G27840.4 | Thale cress | cytosol | 69.63 | 68.79 |
| Bra020573.1-P | Field mustard | cytosol | 71.17 | 67.44 |
| CDY40717 | Canola | cytosol | 72.39 | 64.84 |
| OQU77459 | Sorghum | cytosol | 91.1 | 62.53 |
| CDX74139 | Canola | cytosol | 72.09 | 62.5 |
| KRG96778 | Soybean | nucleus | 71.78 | 62.4 |
| HORVU6Hr1G092760.2 | Barley | cytosol | 57.36 | 59.74 |
| HORVU6Hr1G091550.13 | Barley | cytosol | 65.03 | 58.73 |
| HORVU3Hr1G014590.4 | Barley | cytosol | 50.61 | 47.55 |
| HORVU7Hr1G086410.1 | Barley | cytosol | 42.64 | 45.42 |
| HORVU5Hr1G074200.4 | Barley | cytosol | 42.64 | 45.28 |
| HORVU3Hr1G064290.2 | Barley | cytosol | 39.26 | 42.24 |
| HORVU5Hr1G053560.4 | Barley | cytosol | 42.64 | 41.74 |
| HORVU5Hr1G109430.2 | Barley | cytosol, plastid | 42.64 | 40.88 |
| HORVU6Hr1G038770.1 | Barley | cytosol | 43.25 | 37.01 |
| HORVU1Hr1G083000.1 | Barley | cytosol | 38.65 | 35.29 |
| HORVU4Hr1G074680.4 | Barley | cytosol, plastid | 42.02 | 33.41 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.1.1 | Gene3D:3.60.21.10 | UniProt:A0A287EW24 | InterPro:Calcineurin-like_PHP_ApaH |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0046872 |
| EnsemblPlantsGene:HORVU1Hr1G022370 | EnsemblPlants:HORVU1Hr1G022370.5 | InterPro:IPR029052 | InterPro:Metallo-depent_PP-like | PFAM:PF00149 | PFAM:PF16891 |
| PRINTS:PR00114 | ScanProsite:PS00125 | PANTHER:PTHR11668 | PANTHER:PTHR11668:SF305 | SMART:SM00156 | SUPFAM:SSF56300 |
| InterPro:STPPase_N | InterPro:Ser/Thr-sp_prot-phosphatase | UniParc:UPI000B46AA10 | SEG:seg | : | : |
Description
Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A287EW24]
Coordinates
chrchr1H:+:94326849..94329662
Molecular Weight (calculated)
36965.7 Da
IEP (calculated)
5.307
GRAVY (calculated)
-0.186
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMTRASMGA MEGAAVDEVV RRLVEGGRGG RQVQLSEAEI RQLCVDAKRV LLSQPNLLRI QAPVKICGDI HGQFVDLLRL FDLGGYPPTS TYVFLGDYVD
101: RGKQSLETIC LLLAYKIRYP DKVFLLRGNH EDAKINRVYG FYDECKRRFN VRLWKIFSDC FNCLPIAALI DDKILCMHGG LSPELTNLDQ IKDIERPAEI
201: PDYGLLCDLL WSDPSPEGEG WGESDRGVSC TFGADKLIEF LEKNDLDLIC RAHQVVEDGY EFFAQRRLVT IFSAPNYCGE FDNVGALLSI DENLMCSFQI
301: LKPNETGTPR VKRQIPNKRE LNVRKI
101: RGKQSLETIC LLLAYKIRYP DKVFLLRGNH EDAKINRVYG FYDECKRRFN VRLWKIFSDC FNCLPIAALI DDKILCMHGG LSPELTNLDQ IKDIERPAEI
201: PDYGLLCDLL WSDPSPEGEG WGESDRGVSC TFGADKLIEF LEKNDLDLIC RAHQVVEDGY EFFAQRRLVT IFSAPNYCGE FDNVGALLSI DENLMCSFQI
301: LKPNETGTPR VKRQIPNKRE LNVRKI
001: MMTSMEGMME MGVLDDIIRR LLEGKGGKQV QLSEVEIRQL CVNARQIFLS QPNLLELHAP IRICGDIHGQ YQDLLRLFEY GGYPPSANYL FLGDYVDRGK
101: QSLETICLLL AYKIRYPSKI FLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKIFTDCFNC LPVAALIDEK ILCMHGGLSP ELENLGQIRE IQRPTEIPDN
201: GLLCDLLWSD PDQKNEGWTD SDRGISCTFG ADVVADFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDQS LVCSFEILKP
301: APASSTNPLK KVPKMGKS
101: QSLETICLLL AYKIRYPSKI FLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKIFTDCFNC LPVAALIDEK ILCMHGGLSP ELENLGQIRE IQRPTEIPDN
201: GLLCDLLWSD PDQKNEGWTD SDRGISCTFG ADVVADFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDQS LVCSFEILKP
301: APASSTNPLK KVPKMGKS
Arabidopsis Description
TOPP9Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VKY6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.