CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG34763

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G05580.1	KXG34763	AT5G52200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037601_P001	Maize	cytosol	61.89	98.0
TraesCS1A01G095500.1	Wheat	cytosol	62.74	91.69
TraesCS1B01G128100.1	Wheat	cytosol	62.74	91.69
TraesCS1D01G104400.1	Wheat	cytosol	62.53	91.38
HORVU1Hr1G022370.5	Barley	cytosol	62.53	91.1
EES02921	Sorghum	cytosol	60.21	88.0
GSMUA_Achr11P...	Banana	cytosol	52.84	79.43
GSMUA_Achr2P02240_001	Banana	cytosol	52.21	77.26
CDX86135	Canola	cytosol	40.63	75.98
PGSC0003DMT400063710	Potato	cytosol	49.68	74.92
Solyc01g099860.2.1	Tomato	cytosol, unclear	49.68	74.92
CDY05560	Canola	cytosol	50.11	74.84
Bra001155.1-P	Field mustard	cytosol	49.89	74.53
CDY25019	Canola	cytosol	49.89	74.53
Bra039424.1-P	Field mustard	cytosol	50.11	74.14
AT3G05580.1	Thale cress	cytosol	49.47	73.9
CDY18815	Canola	cytosol	49.47	73.9
Bra040535.1-P	Field mustard	cytosol	49.47	73.9
CDY27754	Canola	cytosol	49.89	73.83
CDY05182	Canola	cytosol	49.89	73.83
CDX80617	Canola	cytosol	49.47	73.67
Bra009941.1-P	Field mustard	cytosol	49.26	73.35
GSMUA_Achr8P06590_001	Banana	cytosol	43.16	73.21
KRH68493	Soybean	cytosol	49.68	72.84
VIT_14s0060g01750.t01	Wine grape	cytosol	48.63	71.08
EES13960	Sorghum	cytosol	45.26	70.49
AT5G27840.4	Thale cress	cytosol	48.63	70.0
GSMUA_Achr11P...	Banana	cytosol	51.79	69.69
EER95117	Sorghum	cytosol	47.16	69.57
Bra020573.1-P	Field mustard	cytosol	49.68	68.6
CDY40717	Canola	cytosol	51.58	67.31
EER89259	Sorghum	cytosol	45.89	67.28
KRG96778	Soybean	nucleus	51.37	65.07
CDX74139	Canola	cytosol	51.16	64.63
KXG31386	Sorghum	cytosol	45.47	58.86
EER90463	Sorghum	cytosol	42.74	58.17
EER88560	Sorghum	cytosol	28.84	44.77
EER98649	Sorghum	cytosol	28.84	44.63
KXG37326	Sorghum	cytosol	28.84	44.63
EES06511	Sorghum	cytosol	28.63	44.44
EER94259	Sorghum	cytosol	28.0	42.22
EES01303	Sorghum	cytosol	26.53	41.58
EER95434	Sorghum	plastid	28.63	35.32

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	UniProt:A0A1Z5R1P6	InterPro:Calcineurin-like_PHP_ApaH
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872
InterPro:IPR029052	InterPro:Metallo-depent_PP-like	EnsemblPlants:OQU77459	ProteinID:OQU77459	ProteinID:OQU77459.1	PFAM:PF00149
PFAM:PF16891	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF305	SMART:SM00156
EnsemblPlantsGene:SORBI_3009G050000	SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI000B8BAD84	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:4999958..5004451

Molecular Weight (calculated)

53209.1 Da

IEP (calculated)

6.917

GRAVY (calculated)

-0.245

Length

475 amino acids

Sequence
(BLAST)

001: MQLQVSLCLG IAFGDTHFFN TLCSNLQVHP FSVTGDLKGK YQHSNDGPKN VLMGPFRVYY RDKRHNSKWQ NSWTEIHVVG QRPSITEPTA DIPSRGFEHF
101: KPSPQRFVRF VDDIPPLSLS SLPLFFLLTP LSRPPPRAAA VSGQAGQEGG GGKMMMTRAP MGPMEGAAVD EVVRRLVEGG RGGRQVQLSE AEIRQLCVEG
201: KRVLLSQPNL LRIHAPVKIC GDIHGQFVDL LRLFDLGGYP PASTYVFLGD YVDRGKQSLE TICLLLAYKI RYPEKIFLLR GNHEDAKINR VYGFYDECKR
301: RFNVRLWKIF SDCFNCLPIA ALIDDKILCM HGGLSPELTS LDQIKDIERP AEIPDYGLLC DLLWSDPSPD GEGWGESDRG VSCTFGADKL VEFLEKNDLD
401: LICRAHQVVE DGYEFFAQRR LVTIFSAPNY CGEFDNAGAL LSIDESLMCS FQILKPTDMG PPHARKQIPN KPARG

Best Arabidopsis Sequence Match ( AT3G05580.1 )
(BLAST)

001: MMTSMEGMME MGVLDDIIRR LLEGKGGKQV QLSEVEIRQL CVNARQIFLS QPNLLELHAP IRICGDIHGQ YQDLLRLFEY GGYPPSANYL FLGDYVDRGK
101: QSLETICLLL AYKIRYPSKI FLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKIFTDCFNC LPVAALIDEK ILCMHGGLSP ELENLGQIRE IQRPTEIPDN
201: GLLCDLLWSD PDQKNEGWTD SDRGISCTFG ADVVADFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDQS LVCSFEILKP
301: APASSTNPLK KVPKMGKS

Arabidopsis Description

TOPP9Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VKY6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.