CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG34763

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G05580.1	KXG34763	AT5G52200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0349400-01	Rice	cytosol	92.62	92.62
TraesCS3D01G199300.1	Wheat	cytosol	91.38	91.38
TraesCS3A01G195500.1	Wheat	cytosol	90.77	85.26
TraesCS3B01G226800.1	Wheat	cytosol	90.46	84.0
HORVU3Hr1G044550.3	Barley	cytosol	71.08	77.26
GSMUA_Achr11P...	Banana	cytosol	75.08	77.22
GSMUA_Achr2P02240_001	Banana	cytosol	74.77	75.7
CDX86135	Canola	cytosol	58.77	75.2
CDY05560	Canola	cytosol	72.92	74.53
CDY25019	Canola	cytosol	72.62	74.21
GSMUA_Achr8P06590_001	Banana	cytosol	63.69	73.93
Bra001155.1-P	Field mustard	cytosol	72.31	73.9
Bra040535.1-P	Field mustard	cytosol	72.31	73.9
CDY18815	Canola	cytosol	72.31	73.9
KRH68493	Soybean	cytosol	73.54	73.77
Bra009941.1-P	Field mustard	cytosol	72.31	73.67
CDX80617	Canola	cytosol	72.0	73.35
Bra039424.1-P	Field mustard	cytosol	72.31	73.21
Solyc01g099860.2.1	Tomato	cytosol, unclear	70.77	73.02
PGSC0003DMT400063710	Potato	cytosol	70.77	73.02
AT3G05580.1	Thale cress	cytosol	71.38	72.96
CDY27754	Canola	cytosol	72.0	72.9
CDY05182	Canola	cytosol	72.0	72.9
Zm00001d009181_P005	Maize	cytosol	81.85	72.28
VIT_14s0060g01750.t01	Wine grape	cytosol	71.38	71.38
EES13960	Sorghum	cytosol	66.15	70.49
GSMUA_Achr11P...	Banana	cytosol	76.0	69.97
AT5G27840.4	Thale cress	cytosol	70.15	69.09
EER95117	Sorghum	cytosol	68.31	68.94
Bra020573.1-P	Field mustard	cytosol	72.0	68.02
EER89259	Sorghum	cytosol	67.38	67.59
CDY40717	Canola	cytosol	72.62	64.84
KRG96778	Soybean	nucleus	73.54	63.73
CDX74139	Canola	cytosol	72.62	62.77
OQU77459	Sorghum	cytosol	88.0	60.21
KXG31386	Sorghum	cytosol	67.38	59.67
EER90463	Sorghum	cytosol	61.23	57.02
EES06511	Sorghum	cytosol	42.46	45.1
EER88560	Sorghum	cytosol	42.15	44.77
EER98649	Sorghum	cytosol	42.15	44.63
KXG37326	Sorghum	cytosol	41.54	43.97
EES01303	Sorghum	cytosol	39.69	42.57
EER94259	Sorghum	cytosol	40.92	42.22
EER95434	Sorghum	plastid	41.23	34.81

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	EntrezGene:8075330	UniProt:C5XJW2
InterPro:Calcineurin-like_PHP_ApaH	EnsemblPlants:EES02921	ProteinID:EES02921	ProteinID:EES02921.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052	InterPro:Metallo-depent_PP-like
PFAM:PF00149	PFAM:PF16891	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF305
SMART:SM00156	EnsemblPlantsGene:SORBI_3003G158400	SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI0001A85156
RefSeq:XP_002457801.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:18171721..18176542

Molecular Weight (calculated)

36541.9 Da

IEP (calculated)

4.918

GRAVY (calculated)

-0.204

Length

325 amino acids

Sequence
(BLAST)

001: MMMTRASMGA MDAAAVDEVV RRLVEGGRGG RQVQLSEAEI RQLCVEAKQV LLSQPNLLRI HAPVKICGDI HGQFVDLLRL FDLGGYPPTS TYIFLGDYVD
101: RGKQSLETIC LLLAYKLKYP DNIYLLRGNH EDAKINRVYG FYDECKRRFN VRLWKIFCDC FNCLPMSALI DDKVLCMHGG LSPELNSLDQ IKDIERPTEI
201: PDYGLLCDLL WSDPSHDTEG WGESDRGVSC TFGADKLVEF LDKNDLDLVC RAHQVVEDGY EFFAERRLVT IFSAPNYCGE FDNAGALLSI DESLMCSFQI
301: LKPNETGGPH SRKPLPSKAP KGENV

Best Arabidopsis Sequence Match ( AT5G27840.1 )
(BLAST)

001: MMTSMEGMVE KGVLDDIIRR LLEGKGGKQV QLSESEIRQL CFNARQIFLS QPNLLDLHAP IRICGDIHGQ YQDLLRLFEY GGYPPSANYL FLGDYVDRGK
101: QSLETICLLL AYKIRYPSKI YLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKVFTDCFNC LPVAALIDEK ILCMHGGLSP DLDNLNQIRE IQRPIEIPDS
201: GLLCDLLWSD PDQKIEGWAD SDRGISCTFG ADKVAEFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDES LVCSFEIMKP
301: APASSSHPLK KVPKMGKS

Arabidopsis Description

TOPP8Calcineurin-like metallo-phosphoesterase superfamily protein [Source:TAIR;Acc:AT5G27840]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.