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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:secretory
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009941.1-P Field mustard cytosol 96.46 76.8
CDX80617 Canola cytosol 96.46 76.8
CDY71651 Canola cytosol 65.35 75.11
CDY05560 Canola cytosol 92.52 73.9
CDY25019 Canola cytosol 92.13 73.58
CDY18815 Canola cytosol 89.76 71.7
CDY27754 Canola cytosol 90.55 71.65
CDY05182 Canola cytosol 90.55 71.65
AT5G27840.4 Thale cress cytosol 92.13 70.91
KRH68493 Soybean cytosol 86.61 67.9
Solyc01g099860.2.1 Tomato cytosol, unclear 82.68 66.67
PGSC0003DMT400063710 Potato cytosol 82.68 66.67
VIT_14s0060g01750.t01 Wine grape cytosol 85.04 66.46
CDY40717 Canola cytosol 90.94 63.46
Zm00001d037601_P001 Maize cytosol 72.44 61.33
CDX74139 Canola cytosol 90.55 61.17
GSMUA_Achr11P... Banana cytosol 74.41 59.81
Os01t0349400-01 Rice cytosol 75.59 59.08
CDX88683 Canola cytosol 71.65 58.9
EES02921 Sorghum cytosol 75.2 58.77
KRG96778 Soybean nucleus 86.61 58.67
CDY32662 Canola cytosol 71.65 58.33
CDX71136 Canola cytosol 70.87 58.25
TraesCS1B01G128100.1 Wheat cytosol 74.41 58.15
HORVU1Hr1G022370.5 Barley cytosol 74.41 57.98
CDY24946 Canola cytosol 72.44 57.86
CDY61002 Canola cytosol 72.44 57.86
TraesCS1A01G095500.1 Wheat cytosol 74.02 57.85
TraesCS1D01G104400.1 Wheat cytosol 74.02 57.85
CDY20490 Canola cytosol 71.26 57.64
TraesCS3D01G199300.1 Wheat cytosol 73.62 57.54
CDY33013 Canola cytosol 69.29 57.52
CDX86100 Canola cytosol 69.29 57.52
CDY40180 Canola cytosol 71.65 57.41
CDX80301 Canola cytosol 68.9 57.19
CDX83308 Canola cytosol 71.26 56.92
Zm00001d009844_P001 Maize cytosol 75.59 56.8
CDY45437 Canola cytosol 71.26 56.74
CDY10577 Canola cytosol 64.96 56.7
GSMUA_Achr2P02240_001 Banana cytosol 71.65 56.7
CDY02866 Canola cytosol 71.65 56.35
CDX95749 Canola cytosol 70.87 56.25
CDY25556 Canola cytosol 70.47 55.76
CDY34395 Canola cytosol 70.47 55.76
CDX86799 Canola cytosol 69.69 55.31
CDY13242 Canola cytosol 69.29 55.0
CDY22350 Canola cytosol 70.47 54.08
CDY60901 Canola cytosol 70.47 54.08
TraesCS3A01G195500.1 Wheat cytosol 73.23 53.76
GSMUA_Achr11P... Banana cytosol 74.41 53.54
TraesCS3B01G226800.1 Wheat cytosol 73.62 53.43
CDX90793 Canola cytosol 67.72 53.42
CDY05136 Canola cytosol 67.32 53.11
GSMUA_Achr8P06590_001 Banana cytosol 57.09 51.79
HORVU3Hr1G044550.3 Barley cytosol 53.54 45.48
Zm00001d009181_P005 Maize cytosol 59.45 41.03
OQU77459 Sorghum cytosol 75.98 40.63
CDX67746 Canola cytosol 32.28 40.39
CDY38778 Canola cytosol 46.06 38.24
CDY07799 Canola cytosol 46.06 38.24
CDY34892 Canola cytosol 46.06 38.24
CDY11632 Canola cytosol 46.06 38.24
CDY45151 Canola cytosol 45.67 37.91
CDY30909 Canola cytosol 45.67 37.91
CDY37977 Canola cytosol 45.28 37.58
CDX93426 Canola cytosol 45.28 37.58
CDY52461 Canola cytosol 44.88 37.25
CDY69521 Canola cytosol 44.88 36.42
CDY14840 Canola cytosol 44.88 36.42
CDY47976 Canola cytosol 44.88 36.42
CDY55398 Canola cytosol 44.88 36.42
CDY51518 Canola cytosol 44.88 36.42
CDY46683 Canola cytosol 43.7 36.39
CDX92800 Canola cytosol 43.7 36.39
CDY66916 Canola cytosol 44.49 36.1
CDX94291 Canola cytosol 43.31 36.07
CDX89309 Canola cytosol 43.31 36.07
CDY00569 Canola cytosol 44.09 35.78
CDX98300 Canola cytosol 44.09 35.78
CDX71949 Canola cytosol 44.09 35.78
CDX88988 Canola cytosol 44.09 35.78
CDY06035 Canola cytosol 44.09 35.78
CDY70204 Canola cytosol 41.73 34.98
CDX82268 Canola cytosol 41.34 34.65
CDY33438 Canola cytosol 41.34 34.65
CDY24572 Canola cytosol 41.34 34.65
CDY25366 Canola cytosol 41.34 34.65
CDY69052 Canola cytosol 41.34 33.44
CDY03595 Canola cytosol 40.94 31.42
CDY36067 Canola plasma membrane 41.34 14.31
CDX89311 Canola cytosol, plastid 23.62 8.7
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.1.1Gene3D:3.60.21.10GO:A0A078DA75EnsemblPlants:CDX86135
ProteinID:CDX86135ProteinID:CDX86135.1InterPro:Calcineurin-like_PHP_ApaHGO:GO:0003674GO:GO:0003824GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00144190001InterPro:IPR029052InterPro:Metallo-depent_PP-likePFAM:PF00149PRINTS:PR00114ScanProsite:PS00125
PANTHER:PTHR11668PANTHER:PTHR11668:SF262SMART:SM00156SUPFAM:SSF56300InterPro:Ser/Thr-sp_prot-phosphataseUniParc:UPI0004EEDB4C
Description
BnaA06g28520D
Coordinates
chrLK031845:+:2..1485
Molecular Weight (calculated)
28715.4 Da
IEP (calculated)
5.744
GRAVY (calculated)
-0.198
Length
254 amino acids
Sequence
(BLAST)
001: WVKVANFRAS LLFEYGGYPP SANFLFLGDY VDRGKQSLET ICLLLAYKIR YPSKIYLLRG NHEDAKINRI YGFYDECKRR FNVRLWKIFT DCFNCLPVAA
101: LIDDKILCMH GGLSPELDNL NQIREIQRPT EIPDSGLLCD LLWSDPDQKI EGWADSDRGI SCTFGADKVA EFLDKNDLDL ICRGHQVVED GYEFFAKRRL
201: VTIFSAPNYG GEFDNAGALL SVDESLVCSF EIMKPATASS SGHPLKKVPK MGKS
Best Arabidopsis Sequence Match ( AT3G05580.1 )
(BLAST)
001: MMTSMEGMME MGVLDDIIRR LLEGKGGKQV QLSEVEIRQL CVNARQIFLS QPNLLELHAP IRICGDIHGQ YQDLLRLFEY GGYPPSANYL FLGDYVDRGK
101: QSLETICLLL AYKIRYPSKI FLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKIFTDCFNC LPVAALIDEK ILCMHGGLSP ELENLGQIRE IQRPTEIPDN
201: GLLCDLLWSD PDQKNEGWTD SDRGISCTFG ADVVADFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDQS LVCSFEILKP
301: APASSTNPLK KVPKMGKS
Arabidopsis Description
TOPP9Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VKY6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.