CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000475.1-P	Field mustard	cytosol	100.0	100.0
CDX95749	Canola	cytosol	99.69	99.06
AT2G29400.1	Thale cress	cytosol	95.91	95.91
CDY45437	Canola	cytosol	95.28	94.98
CDY40180	Canola	cytosol	93.4	93.69
VIT_06s0004g05530.t01	Wine grape	cytosol	81.13	85.71
CDX71136	Canola	cytosol	82.7	85.11
CDY71651	Canola	cytosol	59.12	85.07
CDX88683	Canola	cytosol	82.08	84.47
CDY32662	Canola	cytosol	82.7	84.29
CDY33013	Canola	cytosol	80.19	83.33
CDX80301	Canola	cytosol	79.87	83.01
Solyc06g076430.2.1	Tomato	cytosol, nucleus	80.5	82.58
PGSC0003DMT400078199	Potato	cytosol	80.5	82.58
CDY02866	Canola	cytosol	82.7	81.42
CDY20490	Canola	cytosol	80.19	81.21
GSMUA_Achr8P19510_001	Banana	cytosol	71.07	81.0
Solyc06g005800.2.1	Tomato	cytosol, nucleus	81.13	80.88
CDY10577	Canola	cytosol	73.9	80.76
CDY61002	Canola	cytosol	80.5	80.5
Os03t0268000-01	Rice	cytosol	81.45	80.43
HORVU4Hr1G060490.1	Barley	cytosol	81.13	80.37
TraesCS4A01G093600.1	Wheat	cytosol	81.13	80.37
TraesCS4D01G211500.1	Wheat	cytosol	81.13	80.37
EER95117	Sorghum	cytosol	81.13	80.12
TraesCS4B01G210800.1	Wheat	cytosol	80.82	80.06
CDY24946	Canola	cytosol	79.87	79.87
CDX86100	Canola	cytosol	76.42	79.41
Zm00001d047835_P003	Maize	cytosol, extracellular, plasma membrane	80.19	78.95
HORVU4Hr1G060530.1	Barley	mitochondrion, peroxisome	77.04	78.78
PGSC0003DMT400053683	Potato	cytosol	64.15	78.16
CDX90793	Canola	cytosol	74.21	73.29
CDY34395	Canola	cytosol	73.9	73.21
CDY25556	Canola	cytosol	73.9	73.21
CDX86799	Canola	cytosol	73.58	73.12
CDY13242	Canola	cytosol	73.27	72.81
CDX80617	Canola	cytosol	72.96	72.73
CDY05136	Canola	cytosol	73.58	72.67
CDY22350	Canola	cytosol	75.47	72.51
CDY60901	Canola	cytosol	75.16	72.21
CDY25019	Canola	cytosol	72.01	72.01
CDY05560	Canola	cytosol	71.7	71.7
CDY18815	Canola	cytosol	71.38	71.38
CDX86135	Canola	cytosol	56.92	71.26
CDY27754	Canola	cytosol	71.7	71.03
CDY05182	Canola	cytosol	71.7	71.03
Zm00001d028568_P004	Maize	cytosol	81.45	63.17
CDY40717	Canola	cytosol	72.01	62.91
CDX74139	Canola	cytosol	71.7	60.64
CDY69521	Canola	cytosol	44.03	44.73
CDY55398	Canola	cytosol	44.03	44.73
CDY51518	Canola	cytosol	44.03	44.73
CDY47976	Canola	cytosol	43.71	44.41
CDY14840	Canola	cytosol	43.71	44.41
CDY66916	Canola	cytosol	43.71	44.41
CDY45151	Canola	cytosol	42.45	44.12
CDY37977	Canola	cytosol	42.45	44.12
CDX93426	Canola	cytosol	42.45	44.12
CDX98300	Canola	cytosol	43.4	44.09
CDY00569	Canola	cytosol	43.4	44.09
CDX88988	Canola	cytosol	43.4	44.09
CDX71949	Canola	cytosol	43.4	44.09
CDY06035	Canola	cytosol	43.4	44.09
CDY07799	Canola	cytosol	42.14	43.79
CDY30909	Canola	cytosol	42.14	43.79
CDY38778	Canola	cytosol	42.14	43.79
CDY34892	Canola	cytosol	42.14	43.79
CDY11632	Canola	cytosol	42.14	43.79
CDY46683	Canola	cytosol	41.82	43.61
CDX89309	Canola	cytosol	41.82	43.61
CDX92800	Canola	cytosol	41.82	43.61
CDX94291	Canola	cytosol	41.82	43.61
CDY52461	Canola	cytosol	41.82	43.46
CDY70204	Canola	cytosol	40.57	42.57
CDX82268	Canola	cytosol	39.94	41.91
CDY33438	Canola	cytosol	39.94	41.91
CDY25366	Canola	cytosol	39.94	41.91
CDY24572	Canola	cytosol	39.94	41.91
CDY69052	Canola	cytosol	39.94	40.45
CDX67746	Canola	cytosol	25.47	39.9
CDY03595	Canola	cytosol	39.62	38.07
CDY36067	Canola	plasma membrane	40.25	17.44
CDX89311	Canola	cytosol, plastid	25.16	11.59

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	GO:A0A078D7S8	EnsemblPlants:CDX83308
ProteinID:CDX83308	ProteinID:CDX83308.1	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00138866001	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PFAM:PF16891	PRINTS:PR00114
ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF392	SMART:SM00156	SUPFAM:SSF56300	InterPro:STPPase_N
InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI000253FFA2	:	:	:	:

Description

BnaA03g21980D

Coordinates

chrLK031832:-:966062..968744

Molecular Weight (calculated)

36071.2 Da

IEP (calculated)

4.676

GRAVY (calculated)

-0.200

Length

318 amino acids

Sequence
(BLAST)

001: MADKPAQEQK PAMEPAVLDD IIRRLVEFRN TRPGSGKQVH LSEGEIRQLC AVSKEIFLQQ PNLLELEAPI KICGDIHGQY SDLLRLFEYG GFPPEANYLF
101: LGDYVDRGKQ SLETICLLLA YKIKYPENFF LLRGNHESAS INRIYGFYDE CKRRFNVRLW KIFTDCFNCL PVAALIDDRI LCMHGGISPE LTSLDQIRNI
201: SRPMDIPESG LVCDLLWSDP SGDVKGWGVN DRGVSYTFGA DTVAEFLQKN DMDLICRAHQ VVEDGYEFFA DRQLVTVFSA PNYCGEFDNA GAMMSIDESL
301: MCSFQILKPS DKRSSPFL

Best Arabidopsis Sequence Match ( AT2G29400.1 )
(BLAST)

001: MAEKPAQEQE QKRAMEPAVL DDIIRRLVEF RNTRPGSGKQ VHLSEGEIRQ LCAVSKEIFL QQPNLLELEA PIKICGDIHG QYSDLLRLFE YGGFPPEANY
101: LFLGDYVDRG KQSLETICLL LAYKIKYPEN FFLLRGNHES ASINRIYGFY DECKRRFNVR LWKIFTDCFN CLPVAALIDD RILCMHGGIS PELKSLDQIR
201: NIARPMDIPE SGLVCDLLWS DPSGDVGWGM NDRGVSYTFG ADKVAEFLEK HDMDLICRAH QVVEDGYEFF AERQLVTVFS APNYCGEFDN AGAMMSIDES
301: LMCSFQILKP SEKKSPFL

Arabidopsis Description

TOPP1Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VXL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.