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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX94291 Canola cytosol 100.0 100.0
AT4G26720.1 Thale cress cytosol 97.05 97.05
CDX92800 Canola cytosol 97.05 97.05
CDY46683 Canola cytosol 96.72 96.72
VIT_19s0090g01290.t01 Wine grape cytosol 92.13 92.13
PGSC0003DMT400057148 Potato cytosol 92.13 92.13
Solyc07g065020.2.1 Tomato cytosol 91.8 91.8
KRH14305 Soybean cytosol 91.8 90.91
KRH73826 Soybean cytosol 91.48 90.58
GSMUA_Achr7P06210_001 Banana cytosol 90.16 90.46
EER98649 Sorghum cytosol 90.82 90.23
Os09t0284200-01 Rice cytosol, plasma membrane 90.49 89.9
TraesCS5D01G180100.1 Wheat cytosol 90.16 89.58
TraesCS5A01G176800.1 Wheat cytosol 90.16 89.58
Zm00001d005110_P001 Maize cytosol 72.79 89.52
GSMUA_Achr1P09340_001 Banana cytosol 88.2 88.2
TraesCS5B01G173100.1 Wheat cytosol 90.16 87.3
HORVU5Hr1G053560.4 Barley cytosol 90.16 82.58
CDY38778 Canola cytosol 64.59 64.38
CDY11632 Canola cytosol 64.59 64.38
CDY52461 Canola cytosol 64.26 64.05
CDX93426 Canola cytosol 63.93 63.73
CDY34892 Canola cytosol 63.93 63.73
CDY37977 Canola cytosol 63.93 63.73
CDY07799 Canola cytosol 63.93 63.73
CDY69521 Canola cytosol 65.25 63.58
CDY47976 Canola cytosol 65.25 63.58
CDY00569 Canola cytosol 64.92 63.26
CDY66916 Canola cytosol 64.92 63.26
CDY14840 Canola cytosol 64.92 63.26
CDX88988 Canola cytosol 64.59 62.94
CDX71949 Canola cytosol 64.59 62.94
CDY06035 Canola cytosol 64.59 62.94
CDY51518 Canola cytosol 64.59 62.94
CDY55398 Canola cytosol 64.59 62.94
CDX98300 Canola cytosol 64.59 62.94
CDY45151 Canola cytosol 62.95 62.75
CDY30909 Canola cytosol 62.95 62.75
CDY24572 Canola cytosol 59.67 60.07
CDY70204 Canola cytosol 59.34 59.74
CDY25366 Canola cytosol 59.34 59.74
CDY33438 Canola cytosol 59.02 59.41
CDX82268 Canola cytosol 58.69 59.08
CDX67746 Canola cytosol 38.69 58.13
CDY69052 Canola cytosol 59.02 57.32
CDY03595 Canola cytosol 59.34 54.68
CDY71651 Canola cytosol 32.46 44.8
CDX71136 Canola cytosol 44.92 44.34
CDX88683 Canola cytosol 44.59 44.01
CDX86135 Canola cytosol 36.07 43.31
CDY32662 Canola cytosol 43.93 42.95
CDY20490 Canola cytosol 43.93 42.68
CDY33013 Canola cytosol 42.62 42.48
CDX80301 Canola cytosol 42.62 42.48
CDY61002 Canola cytosol 44.26 42.45
CDY24946 Canola cytosol 44.26 42.45
CDY05560 Canola cytosol 43.93 42.14
CDX80617 Canola cytosol 43.93 42.01
CDX95749 Canola cytosol 43.93 41.88
CDY18815 Canola cytosol 43.61 41.82
CDX83308 Canola cytosol 43.61 41.82
CDY25019 Canola cytosol 43.61 41.82
CDY02866 Canola cytosol 43.93 41.49
CDY10577 Canola cytosol 39.34 41.24
CDY05182 Canola cytosol 43.28 41.12
CDY27754 Canola cytosol 43.28 41.12
CDX90793 Canola cytosol 43.28 40.99
CDY45437 Canola cytosol 42.62 40.75
CDY40180 Canola cytosol 42.3 40.69
CDY05136 Canola cytosol 42.95 40.68
CDX86799 Canola cytosol 42.62 40.62
CDY25556 Canola cytosol 42.62 40.5
CDY34395 Canola cytosol 42.62 40.5
CDY13242 Canola cytosol 42.3 40.31
CDX86100 Canola cytosol 40.33 40.2
CDY22350 Canola cytosol 42.95 39.58
CDY60901 Canola cytosol 42.62 39.27
CDY40717 Canola cytosol 43.28 36.26
CDX74139 Canola cytosol 43.28 35.11
Bra026408.1-P Field mustard cytosol 100.0 24.8
CDY36067 Canola plasma membrane 58.69 24.39
CDX89311 Canola cytosol, plastid 20.33 8.99
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.1.3.1Gene3D:3.60.21.10GO:A0A078DL13EnsemblPlants:CDX89309
ProteinID:CDX89309ProteinID:CDX89309.1InterPro:Calcineurin-like_PHP_ApaHGO:GO:0003674GO:GO:0003824GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00149524001InterPro:IPR029052InterPro:Metallo-depent_PP-likePFAM:PF00149PRINTS:PR00114ScanProsite:PS00125
PANTHER:PTHR11668PANTHER:PTHR11668:SF380SMART:SM00156SUPFAM:SSF56300InterPro:Ser/Thr-sp_prot-phosphataseUniParc:UPI0004EBE5D8
Description
BnaA01g15840D
Coordinates
chrLK031858:-:804348..806438
Molecular Weight (calculated)
34789.5 Da
IEP (calculated)
4.705
GRAVY (calculated)
-0.196
Length
305 amino acids
Sequence
(BLAST)
001: MSDLDKQIEQ LKRCEPLSES EVKSLCLKAM EILVEESNVQ RVDAPVTLCG DIHGQFYDMM ELFKVGGDCP KTNYLFLGDF VDRGYYSVET FLLLLALKVR
101: YPDRITLIRG NHESRQITQV YGFYDECLRK YGSVNVWRYC TDIFDYMSLS AVVENKIFCV HGGLSPAIIT LDQIRTIDRK QEVPHDGAMC DLLWSDPEDI
201: VDGWGLSPRG AGFLFGGSVV SSFNHTNNID YIARAHQLVM EGYKWMFDSQ IVTVWSAPNY CYRCGNVASI LELDENLNKE FRVFEAAQQD SRGPPAKKPA
301: PDYFL
Best Arabidopsis Sequence Match ( AT4G26720.1 )
(BLAST)
001: MSDLDRQIGQ LKRCEPLSES EVKALCLKAM EILVEESNVQ RVDAPVTLCG DIHGQFYDMM ELFKVGGDCP KTNYLFMGDF VDRGYYSVET FLLLLALKVR
101: YPDRITLIRG NHESRQITQV YGFYDECLRK YGSSNVWRYC TDIFDYMSLS AVVENKIFCV HGGLSPAIMT LDQIRTIDRK QEVPHDGAMC DLLWSDPEDI
201: VDGWGLSPRG AGFLFGGSVV TSFNHSNNID YIARAHQLVM EGYKWMFDSQ IVTVWSAPNY CYRCGNVASI LELDENLNKE FRVFDAAQQD SRGPPAKKPA
301: PDYFL
Arabidopsis Description
PPX1Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178V0Q8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.