Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX67659
CDX72108
CDX76014
CDX89437
CDY03368
CDY27189
CDY47381
CDY51261

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G50370.1 CDX67659 AT3G56850.1 23404889
AT1G50370.1 CDX72108 AT3G56850.1 23404889
AT1G50370.1 CDX76014 AT3G56850.1 23404889
AT1G50370.1 CDY27189 AT3G56850.1 23404889
AT1G50370.1 CDY47381 AT3G56850.1 23404889
AT1G50370.1 CDY51261 AT3G56850.1 23404889
AT1G50370.1 CDX89437 AT4G25200.1 21798944
AT1G50370.1 CDY03368 AT4G25200.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69052 Canola cytosol 93.96 99.04
AT1G50370.1 Thale cress cytosol 88.82 97.03
CDY25366 Canola cytosol 87.92 96.04
KRH36174 Soybean cytosol, nucleus 87.92 96.04
KRG90576 Soybean cytosol, nucleus 87.61 95.71
VIT_10s0071g00950.t01 Wine grape cytosol 87.61 95.71
KRH36176 Soybean cytosol 87.61 95.71
CDY33438 Canola cytosol 87.61 95.71
CDY70204 Canola cytosol 87.31 95.38
CDY24572 Canola cytosol 87.31 95.38
PGSC0003DMT400039336 Potato cytosol 87.01 95.05
Solyc06g072140.2.1 Tomato cytosol 87.01 95.05
CDX82268 Canola cytosol 86.71 94.72
Solyc03g019900.2.1 Tomato cytosol 86.71 94.72
GSMUA_AchrUn_... Banana cytosol 86.4 94.39
GSMUA_Achr9P21520_001 Banana cytosol 85.5 93.71
HORVU3Hr1G064290.2 Barley cytosol 85.2 93.07
TraesCS3A01G261200.1 Wheat cytosol 85.2 93.07
TraesCS3B01G294200.1 Wheat cytosol, golgi, plastid 85.2 93.07
TraesCS3D01G261300.1 Wheat cytosol 85.2 93.07
Os01t0691700-01 Rice cytosol, plasma membrane 84.89 92.74
EES01303 Sorghum cytosol 83.99 91.75
Zm00001d011634_P003 Maize cytosol 83.99 91.75
TraesCS1D01G380200.1 Wheat cytosol 83.38 91.09
KRH40922 Soybean cytosol 80.06 86.32
TraesCS1B01G393500.1 Wheat cytosol 79.46 86.23
PGSC0003DMT400069607 Potato cytosol 86.71 85.67
HORVU1Hr1G083000.1 Barley cytosol 83.69 77.59
TraesCS1A01G373300.1 Wheat cytosol 82.78 76.54
CDY46683 Canola cytosol 54.98 59.67
CDX92800 Canola cytosol 54.98 59.67
CDX94291 Canola cytosol 54.68 59.34
CDX89309 Canola cytosol 54.68 59.34
CDY37977 Canola cytosol 51.96 56.21
CDX93426 Canola cytosol 51.96 56.21
CDY00569 Canola cytosol 52.57 55.59
CDY14840 Canola cytosol 52.57 55.59
CDY47976 Canola cytosol 52.57 55.59
CDY52461 Canola cytosol 51.36 55.56
CDY07799 Canola cytosol 51.36 55.56
CDY34892 Canola cytosol 51.36 55.56
CDY06035 Canola cytosol 52.27 55.27
CDX98300 Canola cytosol 52.27 55.27
CDX88988 Canola cytosol 52.27 55.27
CDX71949 Canola cytosol 52.27 55.27
CDY11632 Canola cytosol 51.06 55.23
CDY38778 Canola cytosol 51.06 55.23
CDY66916 Canola cytosol 51.96 54.95
CDY55398 Canola cytosol 51.96 54.95
CDY69521 Canola cytosol 51.96 54.95
CDY51518 Canola cytosol 51.96 54.95
CDY30909 Canola cytosol 50.76 54.9
CDY45151 Canola cytosol 50.76 54.9
CDX67746 Canola cytosol 30.21 49.26
CDY71651 Canola cytosol 28.7 42.99
CDX86135 Canola cytosol 31.42 40.94
CDX71136 Canola cytosol 37.16 39.81
CDX95749 Canola cytosol 38.37 39.69
CDX83308 Canola cytosol 38.07 39.62
CDY18815 Canola cytosol 37.76 39.31
CDX80617 Canola cytosol 37.76 39.19
CDX88683 Canola cytosol 36.56 39.16
CDY36067 Canola plasma membrane 86.71 39.1
CDY05560 Canola cytosol 37.46 38.99
CDY33013 Canola cytosol 35.95 38.89
CDX80301 Canola cytosol 35.95 38.89
CDY32662 Canola cytosol 36.56 38.78
CDY25019 Canola cytosol 37.16 38.68
CDY24946 Canola cytosol 37.16 38.68
CDY61002 Canola cytosol 37.16 38.68
CDY20490 Canola cytosol 36.56 38.53
CDX90793 Canola cytosol 37.46 38.51
CDX86799 Canola cytosol 37.16 38.44
CDY13242 Canola cytosol 37.16 38.44
CDY05182 Canola cytosol 37.16 38.32
CDY27754 Canola cytosol 37.16 38.32
CDY10577 Canola cytosol 33.53 38.14
CDY45437 Canola cytosol 36.56 37.93
CDY05136 Canola cytosol 36.86 37.89
CDY40180 Canola cytosol 36.25 37.85
CDX86100 Canola cytosol 34.74 37.58
CDY22350 Canola cytosol 37.46 37.46
CDY02866 Canola cytosol 36.56 37.46
CDY25556 Canola cytosol 36.25 37.38
CDY34395 Canola cytosol 36.25 37.38
CDY60901 Canola cytosol 36.86 36.86
CDY40717 Canola cytosol 37.16 33.79
CDX74139 Canola cytosol 37.76 33.24
CDX89311 Canola cytosol, plastid 20.24 9.71
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.1.5Gene3D:3.60.21.10GO:A0A078ENU3EnsemblPlants:CDY03595
ProteinID:CDY03595ProteinID:CDY03595.1InterPro:Calcineurin-like_PHP_ApaHGO:GO:0003674GO:GO:0003824GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00116342001InterPro:IPR029052InterPro:Metallo-depent_PP-likePFAM:PF00149PRINTS:PR00114ScanProsite:PS00125
PANTHER:PTHR11668PANTHER:PTHR11668:SF24SMART:SM00156SUPFAM:SSF56300InterPro:Ser/Thr-sp_prot-phosphataseUniParc:UPI0004EE25B0
Description
BnaC03g68540D
Coordinates
chrLK031944:+:742649..745564
Molecular Weight (calculated)
37823.0 Da
IEP (calculated)
4.784
GRAVY (calculated)
-0.217
Length
331 amino acids
Sequence
(BLAST)
001: MDLDQWISKV KDGQHLSEDE LHLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPD TNYIFMGDFV DRGYNSLEVF TILLLLKARY
101: PAHITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IVDGTVLCVH GGLSPDVRTI DQIRLIDRNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINNLELV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASML SFNDNMAIAP FGALLSNPNM NGLSCLWEVR
301: QVALERDVKF FTETEENNQM RGPRTGVPYF L
Best Arabidopsis Sequence Match ( AT1G50370.1 )
(BLAST)
001: MDLDQWISKV KDGQHLSEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPE TNYIFMGDFV DRGYNSLEVF TILLLLKARH
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINNLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL
Arabidopsis Description
FYPP1Phytochrome-associated serine/threonine-protein phosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX52]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.