Subcellular Localization
min:
: max
Winner_takes_all: golgi, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
22160430
golgi: 25769308 |
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G261300.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS3A01G261200.1 | Wheat | cytosol | 100.0 | 100.0 |
| HORVU3Hr1G064290.2 | Barley | cytosol | 100.0 | 100.0 |
| Os01t0691700-01 | Rice | cytosol, plasma membrane | 97.69 | 97.69 |
| Zm00001d011634_P003 | Maize | cytosol | 96.37 | 96.37 |
| EES01303 | Sorghum | cytosol | 96.37 | 96.37 |
| Solyc06g072140.2.1 | Tomato | cytosol | 94.72 | 94.72 |
| VIT_10s0071g00950.t01 | Wine grape | cytosol | 94.06 | 94.06 |
| KRG90576 | Soybean | cytosol, nucleus | 94.06 | 94.06 |
| GSMUA_AchrUn_... | Banana | cytosol | 94.06 | 94.06 |
| KRH36174 | Soybean | cytosol, nucleus | 93.73 | 93.73 |
| AT1G50370.1 | Thale cress | cytosol | 93.4 | 93.4 |
| KRH36176 | Soybean | cytosol | 93.4 | 93.4 |
| PGSC0003DMT400039336 | Potato | cytosol | 93.07 | 93.07 |
| AT3G19980.1 | Thale cress | cytosol | 93.07 | 93.07 |
| GSMUA_Achr9P21520_001 | Banana | cytosol | 92.74 | 93.05 |
| CDY70204 | Canola | cytosol | 92.74 | 92.74 |
| CDY33438 | Canola | cytosol | 92.74 | 92.74 |
| Bra038247.1-P | Field mustard | cytosol | 92.74 | 92.74 |
| Solyc03g019900.2.1 | Tomato | cytosol | 92.74 | 92.74 |
| Bra027930.1-P | Field mustard | cytosol | 57.1 | 92.51 |
| CDY25366 | Canola | cytosol | 92.41 | 92.41 |
| CDY24572 | Canola | cytosol | 91.75 | 91.75 |
| Bra001770.1-P | Field mustard | cytosol | 91.75 | 91.75 |
| CDX82268 | Canola | cytosol | 91.75 | 91.75 |
| TraesCS1B01G393500.1 | Wheat | cytosol | 90.43 | 89.84 |
| CDY69052 | Canola | cytosol | 93.07 | 89.81 |
| PGSC0003DMT400069607 | Potato | cytosol | 94.39 | 85.37 |
| CDY03595 | Canola | cytosol | 93.07 | 85.2 |
| KRH40922 | Soybean | cytosol | 86.14 | 85.02 |
| Bra035830.1-P | Field mustard | cytosol | 92.41 | 83.09 |
| Bra014246.1-P | Field mustard | cytosol | 93.4 | 81.56 |
| TraesCS5B01G173100.1 | Wheat | cytosol | 60.4 | 58.1 |
| TraesCS6B01G213200.1 | Wheat | cytosol | 57.43 | 56.86 |
| TraesCS7B01G263500.1 | Wheat | cytosol | 56.77 | 56.21 |
| TraesCS5B01G271300.1 | Wheat | cytosol | 55.45 | 54.72 |
| TraesCS4B01G283300.2 | Wheat | cytosol | 55.78 | 53.99 |
| TraesCS5B01G464000.1 | Wheat | endoplasmic reticulum, plasma membrane | 54.46 | 50.77 |
| TraesCS1B01G128100.1 | Wheat | cytosol | 41.91 | 39.08 |
| TraesCS6B01G449000.1 | Wheat | cytosol | 38.61 | 38.49 |
| TraesCS6B01G436400.1 | Wheat | cytosol | 40.26 | 38.12 |
| CDY36067 | Canola | plasma membrane | 91.75 | 37.87 |
| TraesCS4B01G210800.1 | Wheat | cytosol | 39.93 | 37.69 |
| TraesCS7B01G025800.1 | Wheat | cytosol | 39.27 | 37.07 |
| TraesCS5B01G565000.1 | Wheat | cytosol | 38.94 | 36.2 |
| TraesCS3B01G226800.1 | Wheat | cytosol | 40.92 | 35.43 |
| TraesCS3B01G096600.1 | Wheat | cytosol | 37.29 | 34.56 |
| TraesCS3B01G096800.1 | Wheat | cytosol | 36.3 | 33.74 |
| TraesCS3B01G096100.1 | Wheat | cytosol | 33.33 | 32.79 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G294200.1 | EnsemblPlantsGene:TraesCS3B01G294200 | Gene3D:3.60.21.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:Calcineurin-like_PHP_ApaH | InterPro:IPR029052 | InterPro:Metallo-depent_PP-like | InterPro:Ser/Thr-sp_prot-phosphatase | KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 |
| PANTHER:PTHR11668 | PANTHER:PTHR11668:SF24 | PFAM:PF00149 | PRINTS:PR00114 | ScanProsite:PS00125 | SMART:SM00156 |
| SUPFAM:SSF56300 | TIGR:cd07415 | MapMan:18.4.24.1.5 | : | : | : |
Description
No Description!
Coordinates
chr3B:-:473181518..473188033
Molecular Weight (calculated)
34750.2 Da
IEP (calculated)
4.854
GRAVY (calculated)
-0.247
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLDLWISKV KEGQHLAEHE LQTLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFATGGHVPE TNYIFMGDFV DRGFNSLEVF TILLLLKARY
101: PAHITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IINGTVLCVH GGLSPDVRTV DQIRTIDRNC EIPHEGPFCD LMWSDPEEIE
201: TWAVSPRGAG WLFGSRVTTE FNHVNNLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFDENMDRDV KFFTETEENN QMRGPRTAVP
301: YFL
101: PAHITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IINGTVLCVH GGLSPDVRTV DQIRTIDRNC EIPHEGPFCD LMWSDPEEIE
201: TWAVSPRGAG WLFGSRVTTE FNHVNNLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFDENMDRDV KFFTETEENN QMRGPRTAVP
301: YFL
001: MDLDQWISKV KDGQHLSEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPE TNYIFMGDFV DRGYNSLEVF TILLLLKARH
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINNLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINNLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL
Arabidopsis Description
FYPP1Phytochrome-associated serine/threonine-protein phosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX52]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.