Factsheet for Bra027930.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003253.1-P
Bra007274.1-P
Bra007276.1-P
Bra014668.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G19980.1	Bra003253.1-P	AT3G56850.1	23404889
AT3G19980.1	Bra007274.1-P	AT3G56850.1	23404889
AT3G19980.1	Bra007276.1-P	AT3G56850.1	23404889
AT3G19980.1	Bra014668.1-P	AT3G56850.1	23404889

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001770.1-P	Field mustard	cytosol	99.47	61.39
Bra038247.1-P	Field mustard	cytosol	97.86	60.4
Solyc06g072140.2.1	Tomato	cytosol	94.65	58.42
Solyc03g019900.2.1	Tomato	cytosol	94.65	58.42
PGSC0003DMT400039336	Potato	cytosol	94.65	58.42
AT3G19980.1	Thale cress	cytosol	94.65	58.42
KRH36176	Soybean	cytosol	93.58	57.76
KRH36174	Soybean	cytosol, nucleus	93.58	57.76
VIT_10s0071g00950.t01	Wine grape	cytosol	93.58	57.76
KRG90576	Soybean	cytosol, nucleus	93.58	57.76
GSMUA_Achr9P21520_001	Banana	cytosol	92.51	57.28
TraesCS3D01G261300.1	Wheat	cytosol	92.51	57.1
TraesCS3B01G294200.1	Wheat	cytosol, golgi, plastid	92.51	57.1
TraesCS3A01G261200.1	Wheat	cytosol	92.51	57.1
HORVU3Hr1G064290.2	Barley	cytosol	92.51	57.1
GSMUA_AchrUn_...	Banana	cytosol	91.98	56.77
Os01t0691700-01	Rice	cytosol, plasma membrane	91.44	56.44
KRH40922	Soybean	cytosol	91.98	56.03
EES01303	Sorghum	cytosol	89.84	55.45
Zm00001d011634_P003	Maize	cytosol	89.84	55.45
TraesCS1D01G380200.1	Wheat	cytosol	88.77	54.79
Bra035830.1-P	Field mustard	cytosol	96.26	53.41
PGSC0003DMT400069607	Potato	cytosol	94.12	52.54
Bra014246.1-P	Field mustard	cytosol	94.12	50.72
TraesCS1B01G393500.1	Wheat	cytosol	82.35	50.49
HORVU1Hr1G083000.1	Barley	cytosol	89.3	46.78
TraesCS1A01G373300.1	Wheat	cytosol	88.24	46.09
Bra019089.1-P	Field mustard	cytosol	58.29	35.74
Bra019934.1-P	Field mustard	cytosol	55.62	33.99
Bra016247.1-P	Field mustard	cytosol	55.08	33.66
Bra027833.1-P	Field mustard	cytosol	54.55	33.33
Bra031712.1-P	Field mustard	cytosol	54.01	33.01
Bra016870.1-P	Field mustard	cytosol	51.87	30.99
Bra003340.1-P	Field mustard	cytosol	51.34	30.87
Bra014569.1-P	Field mustard	cytosol	51.34	30.67
Bra007398.1-P	Field mustard	cytosol	51.34	30.67
Bra000262.1-P	Field mustard	cytosol	50.27	28.57
Bra004705.1-P	Field mustard	cytosol	50.8	28.19
CDY36067	Canola	plasma membrane	100.0	25.48
Bra040535.1-P	Field mustard	cytosol	40.64	23.9
Bra009941.1-P	Field mustard	cytosol	40.64	23.82
Bra001155.1-P	Field mustard	cytosol	39.57	23.27
Bra018191.1-P	Field mustard	cytosol	38.5	23.23
Bra006731.1-P	Field mustard	cytosol	37.97	22.98
Bra002590.1-P	Field mustard	cytosol	37.97	22.83
Bra035240.1-P	Field mustard	cytosol	39.04	22.81
Bra020335.1-P	Field mustard	cytosol	37.97	22.76
Bra000740.1-P	Field mustard	cytosol	39.04	22.74
Bra039424.1-P	Field mustard	cytosol	39.04	22.74
Bra000475.1-P	Field mustard	cytosol	38.5	22.64
Bra018397.1-P	Field mustard	cytosol	36.9	22.62
Bra033678.1-P	Field mustard	cytosol	39.04	22.6
Bra027677.1-P	Field mustard	cytosol	37.43	21.81
Bra005009.1-P	Field mustard	cytosol	32.62	21.03
Bra020573.1-P	Field mustard	cytosol	38.5	20.93
Bra000153.1-P	Field mustard	cytosol	39.57	15.1
Bra026408.1-P	Field mustard	cytosol	57.75	8.78

Protein Annotations

EnsemblPlants:Bra027930.1	EnsemblPlants:Bra027930.1-P	EnsemblPlantsGene:Bra027930	Gene3D:3.60.21.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:Calcineurin-like_PHP_ApaH	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	InterPro:Ser/Thr-sp_prot-phosphatase	KEGG:04658+3.1.3.16
KEGG:04660+3.1.3.16	PANTHER:PTHR11668	PANTHER:PTHR11668:SF400	PFAM:PF00149	PRINTS:PR00114	SMART:SM00156
SUPFAM:SSF56300	UniParc:UPI00025421B4	UniProt:M4EGL6	MapMan:50.3.1	:	:

Description

AT3G19980 (E=6e-108) ATFYPP3, EMB2736, STPP | ATFYPP3 (FLOWER-SPECIFIC, PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3); protein binding / protein serine/threonine kinase/ protein serine/threonine phosphatase

Coordinates

chrA09:+:9922149..9923451

Molecular Weight (calculated)

21648.6 Da

IEP (calculated)

4.740

GRAVY (calculated)

-0.337

Length

187 amino acids

Sequence
(BLAST)

001: MKVYGFYDEC QRKYGNANAW RYCTDVFDYL TISAIIDSTV LCVHGGLSPD VRTIDQIRLV DRNCEIPHEG PFCDLMWSDP EDIETWAVSP RGAGWLFGSR
101: VTTEFNHINK LDLVCRAHQL VQEGLKYMFQ DKGLVTVWSA PNYCYRCGNV ASILIFDENM ERDVKYFNET EENNQMRGPR TGVPYFL

Best Arabidopsis Sequence Match ( AT1G50370.1 )
(BLAST)

001: MDLDQWISKV KDGQHLSEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPE TNYIFMGDFV DRGYNSLEVF TILLLLKARH
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINNLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL

Arabidopsis Description

FYPP1Phytochrome-associated serine/threonine-protein phosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX52]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.