Factsheet for Bra000153.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61002	Canola	cytosol	64.29	99.06
CDY24946	Canola	cytosol	63.67	98.11
AT2G39840.1	Thale cress	cytosol	63.88	97.51
Bra005009.1-P	Field mustard	cytosol	56.33	95.17
KRH73092	Soybean	cytosol, nucleus	58.37	90.51
KRH15048	Soybean	cytosol	58.16	90.48
PGSC0003DMT400017290	Potato	cytosol	55.51	89.47
Solyc06g030490.2.1	Tomato	cytosol	55.51	89.47
VIT_13s0019g02410.t01	Wine grape	cytosol	56.73	88.82
HORVU4Hr1G060490.1	Barley	cytosol	57.76	88.16
TraesCS4D01G211500.1	Wheat	cytosol	57.76	88.16
TraesCS4A01G093600.1	Wheat	cytosol	57.76	88.16
Os03t0268000-01	Rice	cytosol	57.76	87.89
TraesCS4B01G210800.1	Wheat	cytosol	57.55	87.85
HORVU4Hr1G060530.1	Barley	mitochondrion, peroxisome	55.1	86.82
EER95117	Sorghum	cytosol	56.53	86.02
GSMUA_Achr8P19510_001	Banana	cytosol	48.37	84.95
Zm00001d047835_P003	Maize	cytosol, extracellular, plasma membrane	55.92	84.83
Bra018397.1-P	Field mustard	cytosol	51.63	82.95
Bra006731.1-P	Field mustard	cytosol	52.04	82.52
Bra020335.1-P	Field mustard	cytosol	52.24	82.05
Bra002590.1-P	Field mustard	cytosol	51.84	81.67
Bra000475.1-P	Field mustard	cytosol	52.04	80.19
Bra018191.1-P	Field mustard	cytosol	50.0	79.03
Bra035240.1-P	Field mustard	cytosol	49.18	75.31
Bra027677.1-P	Field mustard	cytosol	49.18	75.08
Bra033678.1-P	Field mustard	cytosol	49.39	74.92
Bra009941.1-P	Field mustard	cytosol	47.76	73.35
Bra000740.1-P	Field mustard	cytosol	47.76	72.9
Bra040535.1-P	Field mustard	cytosol	46.73	72.01
Bra039424.1-P	Field mustard	cytosol	47.14	71.96
Bra001155.1-P	Field mustard	cytosol	46.33	71.38
Zm00001d028568_P004	Maize	cytosol	56.73	67.8
Bra020573.1-P	Field mustard	cytosol	47.35	67.44
Bra016247.1-P	Field mustard	cytosol	29.18	46.73
Bra031712.1-P	Field mustard	cytosol	28.78	46.08
Bra027833.1-P	Field mustard	cytosol	27.96	44.77
Bra019934.1-P	Field mustard	cytosol	27.96	44.77
Bra019089.1-P	Field mustard	cytosol	27.35	43.93
Bra016870.1-P	Field mustard	cytosol	27.35	42.81
Bra014569.1-P	Field mustard	cytosol	27.14	42.49
Bra007398.1-P	Field mustard	cytosol	27.14	42.49
Bra003340.1-P	Field mustard	cytosol	26.94	42.44
Bra038247.1-P	Field mustard	cytosol	25.71	41.58
Bra001770.1-P	Field mustard	cytosol	25.51	41.25
Bra000262.1-P	Field mustard	cytosol	27.14	40.43
Bra027930.1-P	Field mustard	cytosol	15.1	39.57
Bra004705.1-P	Field mustard	cytosol	26.94	39.17
Bra035830.1-P	Field mustard	cytosol	25.31	36.8
Bra014246.1-P	Field mustard	cytosol	25.31	35.73
Bra026408.1-P	Field mustard	cytosol	29.8	11.87

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	EnsemblPlantsGene:Bra000153	EnsemblPlants:Bra000153.1
EnsemblPlants:Bra000153.1-P	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052	UniProt:M4C7H5	InterPro:Metallo-depent_PP-like	PFAM:PF00149
PFAM:PF16891	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF403	SMART:SM00156
SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI000254024E	SEG:seg	:

Description

AT2G39840 (E=1e-185) TOPP4 | TOPP4; protein serine/threonine phosphatase

Coordinates

chrA03:+:9592582..9595327

Molecular Weight (calculated)

54252.7 Da

IEP (calculated)

5.558

GRAVY (calculated)

-0.257

Length

490 amino acids

Sequence
(BLAST)

001: MVREYVSPQI KREKREKREK RDVGGGRVTS PARVGDGGSP SLSFSTSARL GVSTTVHGDS QLLDPGGGGS ESSTIAAKDS EERRLFQLCA VVKFPGCRGV
101: LGFLEESPSG TVEALRYGTK EFRFGPGICV SDLRFGNGER CGDATSSRHV SLVVEDGNTC PSSFNEEMCE TASAFAGGQQ TAIDAAVLDD IIRRLTEVRL
201: ARPGKQVQLS EAEIKQLCTT ARDIFLQQPN LLELEAPIKI CGDIHGQYSD LLRLFEYGGF PPSANYLFLG DYVDRGKQSL ETICLLLAYK IKYPGNFFLL
301: RGNHECASIN RIYGFYDECK RRFNVRVWKV FTDCFNCLPV AALIDDKILC MHGGLSPDLD HLDEIRSLPR PTMIPDTGLL CDLLWSDPGK DVKGWGMNDR
401: GVSYTFGPDK VSEFLTKHDL DLVCRAHQVV EDGYEFFADR QLVTVFSAPN YCGEFDNAGA MMSVDENLMC SFQILKPAEK KSKFMMSTKI

Best Arabidopsis Sequence Match ( AT2G39840.1 )
(BLAST)

001: MATTTTTQGQ QTAIDSAVLD DIIRRLTEVR LARPGKQVQL SEAEIKQLCT TARDIFLQQP NLLELEAPIK ICGDIHGQYS DLLRLFEYGG FPPSANYLFL
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I

Arabidopsis Description

TOPP4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VUA1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.