Factsheet for PGSC0003DMT400017290

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g030490.2.1	Tomato	cytosol	99.34	99.34
KRH15048	Soybean	cytosol	90.13	86.98
KRH73092	Soybean	cytosol, nucleus	89.8	86.39
CDY61002	Canola	cytosol	89.47	85.53
VIT_13s0019g02410.t01	Wine grape	cytosol	87.83	85.3
CDY24946	Canola	cytosol	89.14	85.22
AT2G39840.1	Thale cress	cytosol	89.8	85.05
CDY20490	Canola	cytosol	87.83	85.03
HORVU4Hr1G060530.1	Barley	mitochondrion, peroxisome	86.51	84.57
GSMUA_Achr8P19510_001	Banana	cytosol	76.97	83.87
CDY10577	Canola	cytosol	80.26	83.85
TraesCS4A01G093600.1	Wheat	cytosol	88.49	83.8
TraesCS4D01G211500.1	Wheat	cytosol	88.49	83.8
HORVU4Hr1G060490.1	Barley	cytosol	88.49	83.8
TraesCS4B01G210800.1	Wheat	cytosol	88.16	83.49
Bra005009.1-P	Field mustard	cytosol	79.28	83.1
Os03t0268000-01	Rice	cytosol	87.83	82.92
EER95117	Sorghum	cytosol	87.5	82.61
PGSC0003DMT400078199	Potato	cytosol	82.89	81.29
Zm00001d047835_P003	Maize	cytosol, extracellular, plasma membrane	85.53	80.5
PGSC0003DMT400044371	Potato	cytosol	83.55	76.97
PGSC0003DMT400053683	Potato	cytosol	65.79	76.63
PGSC0003DMT400041996	Potato	cytosol	85.86	75.87
PGSC0003DMT400063710	Potato	cytosol	73.03	70.48
Zm00001d028568_P004	Maize	cytosol	87.17	64.63
PGSC0003DMT400060162	Potato	cytosol	84.54	62.23
Bra000153.1-P	Field mustard	cytosol	89.47	55.51
PGSC0003DMT400057148	Potato	cytosol	46.38	46.23
PGSC0003DMT400058216	Potato	cytosol	46.38	46.08
PGSC0003DMT400013570	Potato	cytosol	45.72	45.42
PGSC0003DMT400004853	Potato	cytosol	45.72	45.42
PGSC0003DMT400081973	Potato	cytosol	43.75	42.49
PGSC0003DMT400079934	Potato	cytosol	43.42	42.31
PGSC0003DMT400039336	Potato	cytosol	40.79	40.92
PGSC0003DMT400069607	Potato	cytosol	40.79	37.01

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102590757	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	InterPro:Calcineurin-like_PHP_ApaH
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0006470
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009987
GO:GO:0010161	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052	UniProt:M1A8S7
InterPro:Metallo-depent_PP-like	PFAM:PF00149	PFAM:PF16891	EnsemblPlantsGene:PGSC0003DMG400006739	PGSC:PGSC0003DMG400006739	EnsemblPlants:PGSC0003DMT400017290
PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF403	SMART:SM00156	SUPFAM:SSF56300
InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI0002964848	RefSeq:XP_006346818.1	:	:

Description

Serine/threonine-protein phosphatase PP1 isozyme 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400006739]

Coordinates

chr6:+:16991723..17001511

Molecular Weight (calculated)

34570.9 Da

IEP (calculated)

5.459

GRAVY (calculated)

-0.158

Length

304 amino acids

Sequence
(BLAST)

001: MDPAAVDRII EKLLEVRLSK PGKLVQLSES EIKQLCVSSR DIFVKQPNLL ELEAPIKICG DIHGQYSDLL RLFEYGGFPP KANYLFLGDY VDRGKQSLET
101: ICLLLAYKIK YPENFFLLRG NHECASINRI YGFYDECKRR FNVKLWKSFT DCFNCLPVAA LIDEKILCMH GGLSPDLSSL DQIRNLPRPT AIPDTGLLCD
201: LLWSDPGKDV KGWGMNDRGV SYTFGPDKVS EFLSKHDLDL VCRAHQVVED GYEFFAERQL VTIFSAPNYC GEFDNAGAMM SVDENLMCSF QILKPAEKKN
301: KFMM

Best Arabidopsis Sequence Match ( AT2G39840.1 )
(BLAST)

001: MATTTTTQGQ QTAIDSAVLD DIIRRLTEVR LARPGKQVQL SEAEIKQLCT TARDIFLQQP NLLELEAPIK ICGDIHGQYS DLLRLFEYGG FPPSANYLFL
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I

Arabidopsis Description

TOPP4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VUA1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.