Factsheet for HORVU4Hr1G011360.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G022370.5
HORVU3Hr1G044550.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G52200.1	HORVU1Hr1G022370.5	AT3G05580.1	21798944
AT5G52200.1	HORVU3Hr1G044550.3	AT3G05580.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G068000.1	Wheat	nucleus	94.05	94.61
TraesCS4D01G067000.1	Wheat	nucleus	93.45	94.01
TraesCS4A01G246900.1	Wheat	nucleus	93.45	93.45
TraesCS1B01G066300.1	Wheat	nucleus	87.5	88.02
Os05t0301600-01	Rice	nucleus	74.4	75.76
Zm00001d019263_P001	Maize	nucleus	72.02	73.33
KXG34763	Sorghum	nucleus	71.43	72.29
VIT_16s0100g01230.t01	Wine grape	nucleus	51.19	47.51
KRH38536	Soybean	nucleus	49.4	47.16
GSMUA_Achr6P26070_001	Banana	extracellular	49.4	45.36
KRH09088	Soybean	nucleus	48.21	45.25
PGSC0003DMT400037153	Potato	nucleus	45.24	43.93
Solyc03g025980.2.1	Tomato	nucleus	44.05	43.79
KRG91469	Soybean	nucleus	40.48	43.59
PGSC0003DMT400028137	Potato	nucleus	41.67	43.48
CDY31914	Canola	nucleus	44.64	42.86
CDY00518	Canola	nucleus	45.24	42.46
KRH35346	Soybean	nucleus	39.29	42.31
AT5G52200.1	Thale cress	nucleus	46.43	40.84
CDY38907	Canola	nucleus	44.05	40.44
Bra029133.1-P	Field mustard	nucleus	43.45	39.89
GSMUA_Achr9P05730_001	Banana	golgi, plasma membrane	53.57	36.89
CDY32592	Canola	extracellular	41.67	36.08
VIT_02s0025g04180.t01	Wine grape	nucleus	31.55	36.05
CDX92715	Canola	extracellular	43.45	35.44
PGSC0003DMT400079604	Potato	cytosol	32.74	34.38
Solyc05g005520.1.1	Tomato	cytosol	29.76	32.89
Bra028297.1-P	Field mustard	nucleus	45.83	29.17
Bra019158.1-P	Field mustard	nucleus	43.45	9.35
CDY50200	Canola	nucleus	44.05	9.15

Protein Annotations

MapMan:35.1	GO:GO:0003674	GO:GO:0004864	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009966	GO:GO:0009987	GO:GO:0019538	GO:GO:0030234
GO:GO:0032515	GO:GO:0043086	GO:GO:0043666	EnsemblPlantsGene:HORVU4Hr1G011360	EnsemblPlants:HORVU4Hr1G011360.1	UniProt:M0V3S6
PFAM:PF04979	InterPro:PPI-2	PANTHER:PTHR12398	PANTHER:PTHR12398:SF24	UniParc:UPI00029604BB	SEG:seg

Description

No Description!

Coordinates

chrchr4H:+:34951997..34954650

Molecular Weight (calculated)

18718.0 Da

IEP (calculated)

4.381

GRAVY (calculated)

-1.220

Length

168 amino acids

Sequence
(BLAST)

001: MSSHRVKWNE DNLYEIESNK PVRQKITEPK TPYHPMMDED GSLSPTRPFD KCLDETVSAE AIFTALNGVA SSSKNDSKDD EWASSDDDAD AMEQDGDSEA
101: DKSSVSFKEH RRNHYDEYRK VKELMRTGSL VEDEAHANER GANNIQDKTA GGEQATGDKS ESSASPQV

Best Arabidopsis Sequence Match ( AT5G52200.1 )
(BLAST)

001: MTEPKRGRVQ WDEANIVEIE SNKPVRQKIT EPKTPYHPMM DDDGSLSPRG RAFDECVDDM QRAEELRNVL NDAAASSSRN SSQGSGGGGW SSSDEEEEEA
101: DPMDQDEEGS GSGKNERFNA HRKAHYDEFR KVKELRSSGS FYEEEEEEDD GAKGSKSETT TNSRHTKGGN KELDATKTVS GTSSSSSPEL I

Arabidopsis Description

I-2Protein phosphatase inhibitor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTK0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.