Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr11P... | |
| GSMUA_Achr11P... | |
| GSMUA_Achr2P02240_001 | |
| GSMUA_Achr8P06590_001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH09088 | Soybean | nucleus | 52.46 | 53.63 |
| KXG34763 | Sorghum | nucleus | 48.63 | 53.61 |
| Os05t0301600-01 | Rice | nucleus | 48.09 | 53.33 |
| KRH38536 | Soybean | nucleus | 50.82 | 52.84 |
| Zm00001d019263_P001 | Maize | nucleus | 47.54 | 52.73 |
| TraesCS4A01G246900.1 | Wheat | nucleus | 46.45 | 50.6 |
| TraesCS4D01G067000.1 | Wheat | nucleus | 45.9 | 50.3 |
| VIT_16s0100g01230.t01 | Wine grape | nucleus | 49.18 | 49.72 |
| TraesCS4B01G068000.1 | Wheat | nucleus | 45.36 | 49.7 |
| HORVU4Hr1G011360.1 | Barley | nucleus | 45.36 | 49.4 |
| KRG91469 | Soybean | nucleus | 40.44 | 47.44 |
| TraesCS1B01G066300.1 | Wheat | nucleus | 42.62 | 46.71 |
| Solyc03g025980.2.1 | Tomato | nucleus | 42.08 | 45.56 |
| KRH35346 | Soybean | nucleus | 38.8 | 45.51 |
| GSMUA_Achr9P05730_001 | Banana | golgi, plasma membrane | 60.66 | 45.49 |
| VIT_02s0025g04180.t01 | Wine grape | nucleus | 35.52 | 44.22 |
| PGSC0003DMT400037153 | Potato | nucleus | 41.53 | 43.93 |
| CDY31914 | Canola | nucleus | 41.53 | 43.43 |
| CDY00518 | Canola | nucleus | 41.53 | 42.46 |
| CDY38907 | Canola | nucleus | 42.08 | 42.08 |
| AT5G52200.1 | Thale cress | nucleus | 43.72 | 41.88 |
| Bra029133.1-P | Field mustard | nucleus | 40.44 | 40.44 |
| PGSC0003DMT400028137 | Potato | nucleus | 35.52 | 40.37 |
| CDY32592 | Canola | extracellular | 40.98 | 38.66 |
| CDX92715 | Canola | extracellular | 42.08 | 37.38 |
| Solyc05g005520.1.1 | Tomato | cytosol | 30.05 | 36.18 |
| PGSC0003DMT400079604 | Potato | cytosol | 30.05 | 34.38 |
| Bra028297.1-P | Field mustard | nucleus | 43.17 | 29.92 |
| Bra019158.1-P | Field mustard | nucleus | 42.08 | 9.86 |
| CDY50200 | Canola | nucleus | 42.62 | 9.64 |
Protein Annotations
| MapMan:35.1 | GO:GO:0003674 | GO:GO:0004864 | GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009966 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030234 |
| GO:GO:0032515 | GO:GO:0043086 | GO:GO:0043666 | EnsemblPlantsGene:GSMUA_Achr6G26070_001 | EnsemblPlants:GSMUA_Achr6P26070_001 | EnsemblPlants:GSMUA_Achr6T26070_001 |
| UniProt:M0TAA2 | PFAM:PF04979 | InterPro:PPI-2 | PANTHER:PTHR12398 | PANTHER:PTHR12398:SF24 | UniParc:UPI000295F0E4 |
Description
protein phosphatase inhibitor 2 containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G26070_001]
Coordinates
chr6:+:26961152..26964119
Molecular Weight (calculated)
20472.3 Da
IEP (calculated)
4.289
GRAVY (calculated)
-0.892
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MCIQHMISLF VSCLFLRKSR VRWNEANLDE IEANKPVRQK ITEPKTPYHP MIEDDGAVSP RLAFNECLDN SAHAEALMTA LNDVASSSRS PNGDWTSSED
101: ETDAMEQDDD SEVDVARLSF TEHRKAHYDE FHKVKELLRA KSLVDEDEED NSGGETGKEI GDSTSDEVRG PESGEAQNST PNK
101: ETDAMEQDDD SEVDVARLSF TEHRKAHYDE FHKVKELLRA KSLVDEDEED NSGGETGKEI GDSTSDEVRG PESGEAQNST PNK
001: MTEPKRGRVQ WDEANIVEIE SNKPVRQKIT EPKTPYHPMM DDDGSLSPRG RAFDECVDDM QRAEELRNVL NDAAASSSRN SSQGSGGGGW SSSDEEEEEA
101: DPMDQDEEGS GSGKNERFNA HRKAHYDEFR KVKELRSSGS FYEEEEEEDD GAKGSKSETT TNSRHTKGGN KELDATKTVS GTSSSSSPEL I
101: DPMDQDEEGS GSGKNERFNA HRKAHYDEFR KVKELRSSGS FYEEEEEEDD GAKGSKSETT TNSRHTKGGN KELDATKTVS GTSSSSSPEL I
Arabidopsis Description
I-2Protein phosphatase inhibitor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTK0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.