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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • plastid 2
  • cytosol 1
  • mitochondrion 1
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY00518 Canola nucleus 56.31 64.8
CDY31914 Canola nucleus 53.88 63.43
CDY38907 Canola nucleus 50.0 56.28
CDY32592 Canola extracellular 48.06 51.03
KRH38536 Soybean nucleus 41.75 48.86
KRH09088 Soybean nucleus 42.23 48.6
Os05t0301600-01 Rice nucleus 37.38 46.67
PGSC0003DMT400037153 Potato nucleus 38.84 46.24
Solyc03g025980.2.1 Tomato nucleus 37.38 45.56
TraesCS4A01G246900.1 Wheat nucleus 36.41 44.64
KXG34763 Sorghum nucleus 35.92 44.58
TraesCS4D01G067000.1 Wheat nucleus 35.44 43.71
TraesCS4B01G068000.1 Wheat nucleus 35.44 43.71
HORVU4Hr1G011360.1 Barley nucleus 35.44 43.45
TraesCS1B01G066300.1 Wheat nucleus 34.47 42.52
KRG91469 Soybean nucleus 32.04 42.31
GSMUA_Achr6P26070_001 Banana extracellular 37.38 42.08
KRH35346 Soybean nucleus 31.07 41.03
PGSC0003DMT400028137 Potato nucleus 31.07 39.75
VIT_02s0025g04180.t01 Wine grape nucleus 26.7 37.41
Solyc05g005520.1.1 Tomato cytosol 27.18 36.84
PGSC0003DMT400079604 Potato cytosol 27.18 35.0
GSMUA_Achr9P05730_001 Banana golgi, plasma membrane 39.32 33.2
CDY50200 Canola nucleus 81.07 20.64
Zm00001d010993_P001 Maize extracellular 1.46 12.5
Zm00001d037594_P001 Maize extracellular 1.46 12.5
Zm00001d046694_P001 Maize extracellular 1.46 12.5
Protein Annotations
MapMan:35.1GO:A0A078DTN9EnsemblPlants:CDX92715ProteinID:CDX92715ProteinID:CDX92715.1GO:GO:0003674
GO:GO:0004864GO:GO:0006464GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009966GO:GO:0009987GO:GO:0019538GO:GO:0030234GO:GO:0043666EnsemblPlantsGene:GSBRNA2T00154533001
PFAM:PF04979InterPro:PPI-2PANTHER:PTHR12398PANTHER:PTHR12398:SF24UniParc:UPI0004EE7747SEG:seg
Description
BnaC07g39730D
Coordinates
chrLK031873:-:475377..476955
Molecular Weight (calculated)
22807.0 Da
IEP (calculated)
4.444
GRAVY (calculated)
-0.838
Length
206 amino acids
Sequence
(BLAST)
001: MFPIYGSGAV HIVPFSLAIK QNFSWCSIIK GRVQWDEANI VEIESNKPVR QKITEPKTPY HPPYPMIDDD GGSLSSRVRS FDNFVEMHRA EELKNDLNDL
101: ASSSKIISHI SDSGDWTPSE DEAEPIDQNE DDPEGEKNTS FNEHRRVHYD EFRMVKEMRS SGGSFYGEDA EGDDSAKTGK PEATISQNTP GAADAISSGK
201: SSSSST
Best Arabidopsis Sequence Match ( AT5G52200.1 )
(BLAST)
001: MTEPKRGRVQ WDEANIVEIE SNKPVRQKIT EPKTPYHPMM DDDGSLSPRG RAFDECVDDM QRAEELRNVL NDAAASSSRN SSQGSGGGGW SSSDEEEEEA
101: DPMDQDEEGS GSGKNERFNA HRKAHYDEFR KVKELRSSGS FYEEEEEEDD GAKGSKSETT TNSRHTKGGN KELDATKTVS GTSSSSSPEL I
Arabidopsis Description
I-2Protein phosphatase inhibitor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTK0]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.