Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
28056797
|
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G404700.1 | Wheat | cytosol | 92.18 | 93.09 |
| TraesCS6D01G388000.1 | Wheat | cytosol | 91.86 | 92.76 |
| TraesCS6B01G449000.1 | Wheat | cytosol | 91.21 | 92.11 |
| EES13960 | Sorghum | cytosol | 90.55 | 91.15 |
| Zm00001d032076_P002 | Maize | cytosol | 90.23 | 91.12 |
| GSMUA_Achr4P09690_001 | Banana | cytosol | 85.34 | 85.06 |
| VIT_08s0056g00220.t01 | Wine grape | cytosol | 81.43 | 84.18 |
| GSMUA_Achr8P24570_001 | Banana | cytosol | 83.71 | 83.99 |
| KRH51761 | Soybean | cytosol, nucleus | 80.46 | 81.79 |
| Os06t0164100-02 | Rice | cytosol, nucleus, plasma membrane | 79.48 | 75.78 |
| HORVU6Hr1G092760.2 | Barley | cytosol | 76.87 | 75.4 |
| Os03t0268000-01 | Rice | cytosol | 78.83 | 75.16 |
| Os02t0820000-01 | Rice | cytosol | 75.24 | 73.1 |
| Os01t0349400-01 | Rice | cytosol | 72.96 | 68.92 |
| Os06t0574500-01 | Rice | cytosol, plasma membrane | 43.65 | 43.79 |
| Os02t0217600-02 | Rice | cytosol, plasma membrane | 43.65 | 43.65 |
| Os03t0805300-01 | Rice | plasma membrane | 43.32 | 43.32 |
| Os09t0284200-01 | Rice | cytosol, plasma membrane | 43.32 | 43.32 |
| Os10t0410600-02 | Rice | cytosol, plasma membrane, plastid | 42.67 | 41.72 |
| Os03t0167700-01 | Rice | cytosol | 42.02 | 41.08 |
| Os01t0691700-01 | Rice | cytosol, plasma membrane | 38.44 | 38.94 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.1.1 | Gene3D:3.60.21.10 | EntrezGene:4345748 | EMBL:AK121378 |
| ProteinID:BAD09801.1 | ProteinID:BAD10404.1 | ProteinID:BAF23875.1 | ProteinID:BAT05727.1 | InterPro:Calcineurin-like_PHP_ApaH | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004721 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0046872 | InterPro:IPR029052 |
| InterPro:Metallo-depent_PP-like | EnsemblPlantsGene:Os08g0455600 | EnsemblPlants:Os08t0455600-01 | PFAM:PF00149 | PFAM:PF16891 | PRINTS:PR00114 |
| ScanProsite:PS00125 | PANTHER:PTHR11668 | PANTHER:PTHR11668:SF294 | UniProt:Q6Z0R3 | SMART:SM00156 | SUPFAM:SSF56300 |
| InterPro:STPPase_N | InterPro:Ser/Thr-sp_prot-phosphatase | UniParc:UPI000023AF2B | RefSeq:XP_015649122.1 | SEG:seg | : |
Description
Protein phosphatase 101Similar to Serine/threonine protein phosphatase PP1-alpha catalytic subunit (EC 3.1.3.16) (PP-1A). Splice isoform 1. (Os08t0455600-01)
Coordinates
chr8:+:22334606..22336123
Molecular Weight (calculated)
34615.4 Da
IEP (calculated)
4.793
GRAVY (calculated)
-0.136
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MMDGNAVDEL IRRLLDGKKV KPSSSAKKVQ LSEAEIRQLC VTGKDIFLSQ PNLLELEAPI NVCGDIHGQF SDLLRLFEFG GLPPTANYLF LGDYVDRGKQ
101: SIETICLLLA YKIKYPDNFF LLRGNHECAS INRIYGFYDE CKRRFSVRLW KLFTDCFNCL PVAAVIDDKI LCMHGGLSPD LDSLDRIREI ARPVDVPDQG
201: LLCDLLWSDP DRESSGWGEN DRGVSFTFGA DKVTEFLNKH DLDLICRAHQ VVEDGYEFFA DRQLVTIFSA PNYCGEFNNA GALMNVDASL LCSFQILKPF
301: RGKSQAE
101: SIETICLLLA YKIKYPDNFF LLRGNHECAS INRIYGFYDE CKRRFSVRLW KLFTDCFNCL PVAAVIDDKI LCMHGGLSPD LDSLDRIREI ARPVDVPDQG
201: LLCDLLWSDP DRESSGWGEN DRGVSFTFGA DKVTEFLNKH DLDLICRAHQ VVEDGYEFFA DRQLVTIFSA PNYCGEFNNA GALMNVDASL LCSFQILKPF
301: RGKSQAE
001: MATTTTTQGQ QTAIDSAVLD DIIRRLTEVR LARPGKQVQL SEAEIKQLCT TARDIFLQQP NLLELEAPIK ICGDIHGQYS DLLRLFEYGG FPPSANYLFL
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I
Arabidopsis Description
TOPP4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VUA1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.