Factsheet for Os06t0164100-02

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 23777608
plasma membrane: 27800704

msms PMID: 23777608 doi

H Mujahid, F Tan, J Zhang, BR Nallamilli, K Pendarvis, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G124400.1	Wheat	cytosol	95.34	95.64
TraesCS7B01G025800.1	Wheat	cytosol	95.34	95.64
TraesCS7A01G126500.1	Wheat	cytosol	95.34	95.64
HORVU7Hr1G026400.1	Barley	cytosol	94.1	94.39
Zm00001d045213_P004	Maize	cytosol	90.37	89.81
Zm00001d036285_P001	Maize	cytosol, extracellular	90.06	89.51
EER89259	Sorghum	cytosol	89.75	89.2
GSMUA_Achr2P15380_001	Banana	cytosol	84.78	85.58
VIT_02s0025g00480.t01	Wine grape	cytosol	84.47	85.27
GSMUA_Achr10P...	Banana	cytosol	83.85	84.38
KRH59977	Soybean	nucleus	82.61	82.87
KRH41246	Soybean	nucleus	82.61	82.87
CDY13242	Canola	cytosol	79.81	80.31
AT4G11240.1	Thale cress	cytosol	80.12	80.12
AT1G64040.1	Thale cress	cytosol	80.12	80.12
CDY25556	Canola	cytosol	79.81	80.06
Bra027677.1-P	Field mustard	cytosol	79.81	80.06
CDY34395	Canola	cytosol	79.81	80.06
Bra035240.1-P	Field mustard	cytosol	79.5	80.0
CDX86799	Canola	cytosol	79.5	80.0
Os08t0455600-01	Rice	cytosol, plasma membrane	75.78	79.48
CDX90793	Canola	cytosol	77.64	77.64
Os03t0268000-01	Rice	cytosol	77.64	77.64
Bra000740.1-P	Field mustard	cytosol	77.33	77.57
CDY05136	Canola	cytosol	77.33	77.33
GSMUA_Achr7P10840_001	Banana	cytosol	74.84	75.31
Os02t0820000-01	Rice	cytosol	72.98	74.37
Os01t0349400-01	Rice	cytosol	68.63	68.0
GSMUA_Achr4P31160_001	Banana	cytosol	83.85	62.36
Os03t0805300-01	Rice	plasma membrane	42.24	44.3
Os02t0217600-02	Rice	cytosol, plasma membrane	42.24	44.3
Os06t0574500-01	Rice	cytosol, plasma membrane	41.93	44.12
Os09t0284200-01	Rice	cytosol, plasma membrane	40.37	42.35
Os03t0167700-01	Rice	cytosol	40.99	42.04
Os10t0410600-02	Rice	cytosol, plasma membrane, plastid	40.68	41.72
Os01t0691700-01	Rice	cytosol, plasma membrane	36.96	39.27

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	EntrezGene:4340228	EMBL:AK064345
EMBL:AK102278	ProteinID:BAD67848.1	ProteinID:BAF18815.1	ProteinID:BAS96315.1	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052
InterPro:Metallo-depent_PP-like	EnsemblPlantsGene:Os06g0164100	EnsemblPlants:Os06t0164100-02	PFAM:PF00149	PFAM:PF16891	PRINTS:PR00114
ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF294	UniProt:Q5VRS7	SMART:SM00156	SUPFAM:SSF56300
InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI0000457CD7	RefSeq:XP_015643309.1	SEG:seg	:

Description

Protein phosphatase 83Similar to Serine/threonine protein phosphatase PP1 (EC 3.1.3.16). (Os06t0164100-02)

Coordinates

chr6:-:3264019..3267304

Molecular Weight (calculated)

36186.5 Da

IEP (calculated)

5.454

GRAVY (calculated)

-0.192

Length

322 amino acids

Sequence
(BLAST)

001: MDAAALDDLI RRLLDARGGR TARPAQLADA EIRKLCAAAK DVFLSQPNLL ELEAPIKICG DIHGQYSDLL RLFEYGGFPP EANYLFLGDY VDRGKQSIET
101: ICLLLAYKIK YPENFFLLRG NHECASINRI YGFFDECKRR FNVRIWKVFT DCFNCLPVAA LIDDKILCMH GGLSPDLKNM DQIRNIARPV DVPDHGLLCD
201: LLWSDPDKEI EGWGENDRGV SYTFGADKVA EFLQTHDLDL ICRAHQVVED GYEFFAKRQL VTIFSAPNYC GEFDNAGAMM SIDDSLTCSF QILKPSDKKG
301: KAGTGNMSKP GTPPRKIKIN II

Best Arabidopsis Sequence Match ( AT1G64040.1 )
(BLAST)

001: MEDSVVDDVI KRLLGAKNGK TTKQVQLTEA EIKHLCSTAK QIFLTQPNLL ELEAPIKICG DTHGQFSDLL RLFEYGGYPP AANYLFLGDY VDRGKQSVET
101: ICLLLAYKIK YKENFFLLRG NHECASINRI YGFYDECKKR YSVRVWKIFT DCFNCLPVAA LIDEKILCMH GGLSPELKHL DEIRNIPRPA DIPDHGLLCD
201: LLWSDPDKDI EGWGENDRGV SYTFGADKVE EFLQTHDLDL ICRAHQVVED GYEFFANRQL VTIFSAPNYC GEFDNAGAMM SVDDSLTCSF QILKASEKKG
301: NFGFGKNAGR RGTPPRKGGG KG

Arabidopsis Description

TOPP3Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178WMA0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.