Factsheet for GSMUA_Achr1P11730_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P00500_001
GSMUA_Achr6P02720_001
GSMUA_Achr7P17990_001
GSMUA_Achr7P20990_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10430.1	GSMUA_Achr4P00500_001	AT3G47620.1	21798944
AT1G10430.1	GSMUA_Achr6P02720_001	AT3G47620.1	21798944
AT1G10430.1	GSMUA_Achr7P17990_001	AT3G47620.1	21798944
AT1G10430.1	GSMUA_Achr7P20990_001	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P23950_001	Banana	cytosol	93.79	93.79
KRH69421	Soybean	cytosol, nucleus	93.46	93.46
Solyc01g011340.2.1	Tomato	cytosol, plastid	93.14	93.14
PGSC0003DMT400013570	Potato	cytosol	93.14	93.14
VIT_17s0000g05330.t01	Wine grape	cytosol	92.81	92.81
VIT_14s0066g02240.t01	Wine grape	cytosol	92.81	92.81
KRH74722	Soybean	cytosol, nucleus	92.81	92.81
PGSC0003DMT400004853	Potato	cytosol	92.81	92.81
KRG99209	Soybean	cytosol, nucleus	92.48	92.48
Solyc05g006590.2.1	Tomato	cytosol	92.48	92.48
KRH45793	Soybean	cytosol, nucleus	92.48	92.48
VIT_01s0026g01080.t01	Wine grape	cytosol	92.16	92.16
PGSC0003DMT400058216	Potato	cytosol	91.83	91.83
AT1G10430.1	Thale cress	cytosol	89.87	89.87
CDY38778	Canola	cytosol	89.54	89.54
CDY37977	Canola	cytosol	89.54	89.54
CDY11632	Canola	cytosol	89.54	89.54
CDX93426	Canola	cytosol	89.54	89.54
Bra016247.1-P	Field mustard	cytosol	89.54	89.54
AT1G59830.1	Thale cress	cytosol	89.22	89.22
Bra019934.1-P	Field mustard	cytosol	89.22	89.22
CDY07799	Canola	cytosol	89.22	89.22
CDY34892	Canola	cytosol	89.22	89.22
CDY52461	Canola	cytosol	89.22	89.22
Bra031712.1-P	Field mustard	cytosol	88.89	88.89
CDY30909	Canola	cytosol	88.89	88.89
AT1G69960.1	Thale cress	cytosol	88.56	88.27
Bra027833.1-P	Field mustard	cytosol	88.24	88.24
CDY45151	Canola	cytosol	88.24	88.24
GSMUA_Achr9P11070_001	Banana	cytosol	76.8	80.48
GSMUA_Achr2P12450_001	Banana	cytosol	77.78	75.8
GSMUA_Achr4P28610_001	Banana	cytosol	77.78	75.8
GSMUA_Achr3P20430_001	Banana	plastid	84.97	73.65
GSMUA_Achr8P15360_001	Banana	cytosol	74.18	70.5
GSMUA_Achr4P22190_001	Banana	cytosol	58.5	70.2
GSMUA_Achr7P06210_001	Banana	cytosol	65.03	65.46
GSMUA_Achr1P09340_001	Banana	cytosol	64.38	64.59
GSMUA_AchrUn_...	Banana	cytosol	94.12	60.76
GSMUA_AchrUn_...	Banana	cytosol	55.56	56.11
GSMUA_Achr9P21520_001	Banana	cytosol	55.23	55.96
GSMUA_Achr11P...	Banana	cytosol	45.42	43.99
GSMUA_Achr4P09690_001	Banana	cytosol	44.12	43.83
GSMUA_Achr2P04120_001	Banana	cytosol	43.14	43.42
GSMUA_Achr2P15380_001	Banana	cytosol	44.77	42.95
GSMUA_Achr4P29300_001	Banana	cytosol	44.44	42.77
GSMUA_Achr8P19510_001	Banana	cytosol	38.89	42.65
GSMUA_Achr4P25210_001	Banana	cytosol	44.44	42.63
GSMUA_Achr10P...	Banana	cytosol	44.44	42.5
GSMUA_Achr2P02240_001	Banana	cytosol	44.44	42.37
GSMUA_Achr11P...	Banana	cytosol	44.77	42.02
GSMUA_Achr8P24570_001	Banana	cytosol	41.83	41.83
GSMUA_Achr7P10840_001	Banana	cytosol	43.46	41.56
GSMUA_Achr1P01390_001	Banana	cytosol	44.44	41.34
GSMUA_Achr8P06590_001	Banana	cytosol	36.6	40.0
GSMUA_Achr11P...	Banana	cytosol	45.1	39.09
GSMUA_Achr4P31160_001	Banana	cytosol	42.48	30.02

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:13.4.1.2.3	MapMan:18.4.24.1.2.5	Gene3D:3.60.21.10	InterPro:Calcineurin-like_PHP_ApaH
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr1G11730_001	EnsemblPlants:GSMUA_Achr1P11730_001
EnsemblPlants:GSMUA_Achr1T11730_001	InterPro:IPR029052	UniProt:M0RZ32	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PRINTS:PR00114
ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF375	SMART:SM00156	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase
UniParc:UPI0002968437	:	:	:	:	:

Description

Serine/threonine-protein phosphatase PP2A-1 catalytic subunit [Source:GMGC_GENE;Acc:GSMUA_Achr1G11730_001]

Coordinates

chr1:+:8953975..8961327

Molecular Weight (calculated)

35251.8 Da

IEP (calculated)

4.703

GRAVY (calculated)

-0.332

Length

306 amino acids

Sequence
(BLAST)

001: MPSYADLDRQ IEHLRECKFL PEAEVKALCE QARTILVEEW NVQSVKCPVT VCGDIHGQFH DLIELFRIGG EAPDTNYLFM GDYVDRGYYS VETVTLLVAL
101: KVRYRDRITI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIENQI FCLHGGLSPS LDTLDNIRAL NRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IAQQFNHTNG LTLVARAHQL VMEGYNWCQD KNVVTVFSAP NYCYRCGNMA AIMEIGENME QNFLQFDPAP RQIEPETTRR
301: TPDYFL

Best Arabidopsis Sequence Match ( AT1G10430.1 )
(BLAST)

001: MPSNGDLDRQ IEQLMECKPL SEADVRTLCD QARAILVEEY NVQPVKCPVT VCGDIHGQFY DLIELFRIGG NAPDTNYLFM GDYVDRGYYS VETVSLLVAL
101: KVRYRDRLTI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIESQV FCLHGGLSPS LDTLDNIRSL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IAAQFNHNNG LSLISRAHQL VMEGFNWCQD KNVVTVFSAP NYCYRCGNMA AILEIGENME QNFLQFDPAP RQVEPDTTRK
301: TPDYFL

Arabidopsis Description

PP2A2Serine/threonine-protein phosphatase PP2A-2 catalytic subunit [Source:UniProtKB/Swiss-Prot;Acc:Q07098]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.