Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G102310.1 | Barley | cytosol | 35.46 | 80.65 |
| TraesCS3A01G474600.1 | Wheat | cytosol | 49.65 | 35.18 |
| TraesCS3A01G474500.1 | Wheat | nucleus | 42.55 | 31.58 |
| TraesCS3A01G474200.1 | Wheat | nucleus | 43.26 | 30.81 |
| TraesCS3A01G474800.1 | Wheat | cytosol, nucleus, plastid | 41.13 | 28.71 |
| TraesCS4A01G138000.1 | Wheat | plastid, unclear | 31.91 | 21.63 |
| TraesCS5A01G516100.1 | Wheat | nucleus | 28.37 | 18.02 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G474900.1 | EnsemblPlantsGene:TraesCS3A01G474900 | Gene3D:1.10.8.10 | Gene3D:2.20.70.30 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005854 | InterPro:EGD2/NACA | InterPro:IPR002715 | InterPro:IPR038187 |
| InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | PANTHER:PTHR21713 | PANTHER:PTHR21713:SF16 | PFAM:PF01849 | PFscan:PS51151 |
| PIRSF:PIRSF015901 | SMART:SM01407 | TIGR:cd14358 | MapMan:19.1.2.1.1 | : | : |
Description
No Description!
Coordinates
chr3A:+:706336194..706336717
Molecular Weight (calculated)
15144.1 Da
IEP (calculated)
4.311
GRAVY (calculated)
-0.083
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKLGMKVIT GVNCVTIKKS KTVTFVLSKP DVFKSSHSET YVIIGEIKFE DLNTELQTQA EQFKAPGPSR VNSMGEPSVA AVQDDEEVDE TGVDKKDVEL
101: VMMQASVSRS GAVEALKAAD GDIVSAIMEL TNYVLEGGVV S
101: VMMQASVSRS GAVEALKAAD GDIVSAIMEL TNYVLEGGVV S
001: MTTEEKEILA AKLEEQKIDL DKPEVEDDDD NEDDDSDDDD KDDDEADGLD GEAGGKSKQS RSEKKSRKAM LKLGMKPITG VSRVTVKKSK NILFVISKPD
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
101: VFKSPASDTY VIFGEAKIED LSSQIQSQAA EQFKAPDLSN VISKGESSSA AVVQDDEEVD EEGVEPKDIE LVMTQAGVSR PNAVKALKAA DGDIVSAIME
201: LTT
Arabidopsis Description
Nascent polypeptide-associated complex subunit alpha-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHG9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.