Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G510100.1 | Wheat | cytosol | 92.07 | 95.43 |
| TraesCS3D01G517100.1 | Wheat | cytosol, mitochondrion, nucleus | 73.57 | 95.43 |
| HORVU3Hr1G112010.1 | Barley | cytosol, nucleus, plastid | 94.27 | 85.6 |
| TraesCS3B01G578500.1 | Wheat | cytosol | 74.45 | 77.17 |
| TraesCS3B01G578400.1 | Wheat | cytosol | 74.45 | 76.47 |
| TraesCS3B01G578300.1 | Wheat | cytosol | 48.9 | 68.94 |
| Os01t0963600-01 | Rice | extracellular | 45.37 | 56.59 |
| Zm00001d011813_P001 | Maize | extracellular | 40.97 | 51.38 |
| KXG34187 | Sorghum | cytosol, mitochondrion, nucleus | 39.65 | 48.39 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G578200.1 | EnsemblPlantsGene:TraesCS3B01G578200 | GO:GO:0006950 | GO:GO:0008150 | InterPro:ABA_WDS | PANTHER:PTHR33801 |
| PANTHER:PTHR33801:SF8 | PFAM:PF02496 | SEG:seg | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr3B:+:807812908..807813694
Molecular Weight (calculated)
24392.5 Da
IEP (calculated)
6.766
GRAVY (calculated)
-1.087
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGYYNGGGR TMSYSNTDEC FDGGRTMYSN TTEECYDAGK HGHGHGHGHG HGHGHGGANM YANTTDVECF DSGRHGHGGG GRTMYSNTVD EECFDSGRHG
101: HGHGHGHGHG YGHNDGRAMS YSTTTEECFG GGEQGQGYYK KEVQQHKNRE RVGEVGALAA GAFALYEGYE VKKDPAHARK HQIEAGVAGA AALGAGGYAY
201: HEHREQKQAA YGGQQEYRMP VHNSYCN
101: HGHGHGHGHG YGHNDGRAMS YSTTTEECFG GGEQGQGYYK KEVQQHKNRE RVGEVGALAA GAFALYEGYE VKKDPAHARK HQIEAGVAGA AALGAGGYAY
201: HEHREQKQAA YGGQQEYRMP VHNSYCN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.