Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011813_P001 | Maize | extracellular | 73.12 | 75.14 |
| Os01t0963600-01 | Rice | extracellular | 48.92 | 50.0 |
| TraesCS3D01G517100.1 | Wheat | cytosol, mitochondrion, nucleus | 45.16 | 48.0 |
| TraesCS3A01G510100.1 | Wheat | cytosol | 48.92 | 41.55 |
| TraesCS3B01G578200.1 | Wheat | cytosol | 48.39 | 39.65 |
| TraesCS3A01G509900.1 | Wheat | cytosol | 44.09 | 37.61 |
| TraesCS3D01G517300.1 | Wheat | cytosol | 43.55 | 37.16 |
| TraesCS3B01G578500.1 | Wheat | cytosol | 43.55 | 36.99 |
| TraesCS3D01G517400.1 | Wheat | cytosol | 43.01 | 36.36 |
| TraesCS3B01G578400.1 | Wheat | cytosol | 43.01 | 36.2 |
| TraesCS3A01G509800.1 | Wheat | cytosol | 42.47 | 36.07 |
| HORVU3Hr1G112010.1 | Barley | cytosol, nucleus, plastid | 48.39 | 36.0 |
| HORVU3Hr1G112020.2 | Barley | cytosol | 42.47 | 35.59 |
| TraesCS3A01G510200.1 | Wheat | cytosol | 35.48 | 28.7 |
| TraesCS3A01G510000.1 | Wheat | cytosol | 22.04 | 25.47 |
| TraesCS3B01G578300.1 | Wheat | cytosol | 22.04 | 25.47 |
| TraesCS3D01G517200.1 | Wheat | cytosol | 21.51 | 24.84 |
Protein Annotations
| EnsemblPlants:KXG34187 | EnsemblPlantsGene:SORBI_3003G437800 | GO:GO:0006950 | GO:GO:0008150 | InterPro:ABA_WDS | PANTHER:PTHR33801 |
| PANTHER:PTHR33801:SF8 | PFAM:PF02496 | ProteinID:KXG34187 | ProteinID:KXG34187.1 | SEG:seg | UniParc:UPI00016EF1F9 |
| UniProt:A0A1B6Q8F5 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:73812025..73813272
Molecular Weight (calculated)
20585.3 Da
IEP (calculated)
6.703
GRAVY (calculated)
-1.154
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MADYYHGGRA SMYDDCYDAG RHGGGSMKAY SRTDEYYDNV QDDRIRMRPV YADDDCTGYN GGGYGAGRQT AVYTTDEYSR GGGYGGYGGE QEHFKREERE
101: HKHKERLGEV GALAGGAFAL YEGHRATKDP ANAQRHKIEA GVAAAAALGA GGYAYHEHRE QKAAHYETKQ QAPEHSHRVP HGYYCN
101: HKHKERLGEV GALAGGAFAL YEGHRATKDP ANAQRHKIEA GVAAAAALGA GGYAYHEHRE QKAAHYETKQ QAPEHSHRVP HGYYCN
001: MAKLCCFGSS DYDLVVGRAS TSSGKGRNND GEIKFGYSLV KGKANHPMED YHVSKFVKID GNELGLFAIY DGHLGERVPA YLQKHLFSNI LKEEQFRYDP
101: QRSIIAAYEK TDQAILSHSS DLGRGGSTAV TAILMNGRRL WVANVGDSRA VLSQGGQAIQ MTIDHEPHTE RLSIEGKGGF VSNMPGDVPR VNGQLAVSRA
201: FGDKSLKTHL RSDPDVKDSS IDDHTDVLVL ASDGLWKVNN DVCDL
101: QRSIIAAYEK TDQAILSHSS DLGRGGSTAV TAILMNGRRL WVANVGDSRA VLSQGGQAIQ MTIDHEPHTE RLSIEGKGGF VSNMPGDVPR VNGQLAVSRA
201: FGDKSLKTHL RSDPDVKDSS IDDHTDVLVL ASDGLWKVNN DVCDL
Arabidopsis Description
Probable protein phosphatase 2C 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Z7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.