Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G517200.1 | Wheat | cytosol | 94.41 | 94.41 |
| TraesCS3B01G578300.1 | Wheat | cytosol | 93.79 | 93.79 |
| TraesCS3A01G510100.1 | Wheat | cytosol | 72.05 | 52.97 |
| HORVU3Hr1G112020.2 | Barley | cytosol | 70.81 | 51.35 |
| TraesCS3A01G510200.1 | Wheat | cytosol | 70.81 | 49.57 |
| TraesCS3A01G509800.1 | Wheat | cytosol | 64.6 | 47.49 |
| TraesCS3A01G509900.1 | Wheat | cytosol | 63.98 | 47.25 |
| Os01t0963600-01 | Rice | extracellular | 29.81 | 26.37 |
| Zm00001d011813_P001 | Maize | extracellular | 29.19 | 25.97 |
| KXG34187 | Sorghum | cytosol, mitochondrion, nucleus | 25.47 | 22.04 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G510000.1 | EnsemblPlantsGene:TraesCS3A01G510000 | GO:GO:0006950 | GO:GO:0008150 | InterPro:ABA_WDS | PANTHER:PTHR33801 |
| PANTHER:PTHR33801:SF8 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr3A:-:730266957..730267442
Molecular Weight (calculated)
17301.8 Da
IEP (calculated)
7.075
GRAVY (calculated)
-0.886
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAYYNGGRP MPYSNTDEGF DGGRTIYSTP TECYDASKHG LGTGHGHGYG GTNMYSNTTD VQCFDSSMHG QGRGGGGRTM YSNTAHGLFD SGRPGHGHIH
101: SYGHNDGRIM SYTTTTTKES FGGGEQGQGY YKKEVKQHKN RELLGEVGAF APVITQEVNI A
101: SYGHNDGRIM SYTTTTTKES FGGGEQGQGY YKKEVKQHKN RELLGEVGAF APVITQEVNI A
001: MSDVPSCSSG NDTNNNDSSN FECNICLDLA QDPIVTLCGH LFCWPCLYKW LHLHSQSKDC PVCKAVIEED RLVPLYGRGK SSADPRSKSI PGLEVPNRPS
101: GQRPETAQPP DPNHGFAHHH GFGGFMGGFA APMASARFGN VTLSAAFGGL IPSLFNLHFH GFPDAAMYGA AASGGFPHGF SNPFHGGHSH MHSYQRHTGR
201: QGQQDHHLRI LLLIVFVVVV FSLFLS
101: GQRPETAQPP DPNHGFAHHH GFGGFMGGFA APMASARFGN VTLSAAFGGL IPSLFNLHFH GFPDAAMYGA AASGGFPHGF SNPFHGGHSH MHSYQRHTGR
201: QGQQDHHLRI LLLIVFVVVV FSLFLS
Arabidopsis Description
At1g19310/F18O14_14 [Source:UniProtKB/TrEMBL;Acc:Q9LN67]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.