Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G509800.1 | Wheat | cytosol | 83.78 | 84.93 |
| TraesCS3B01G578500.1 | Wheat | cytosol | 82.88 | 84.02 |
| TraesCS3A01G509900.1 | Wheat | cytosol | 81.53 | 83.03 |
| TraesCS3B01G578400.1 | Wheat | cytosol | 82.43 | 82.81 |
| TraesCS3D01G517400.1 | Wheat | cytosol | 81.98 | 82.73 |
| TraesCS3D01G517300.1 | Wheat | cytosol | 81.08 | 82.57 |
| TraesCS3A01G510000.1 | Wheat | cytosol | 51.35 | 70.81 |
| TraesCS3D01G517200.1 | Wheat | cytosol | 51.35 | 70.81 |
| TraesCS3B01G578300.1 | Wheat | cytosol | 50.45 | 69.57 |
| HORVU3Hr1G112010.1 | Barley | cytosol, nucleus, plastid | 73.42 | 65.2 |
| TraesCS3A01G510200.1 | Wheat | cytosol | 62.16 | 60.0 |
| Os01t0963600-01 | Rice | extracellular | 39.64 | 48.35 |
| Zm00001d011813_P001 | Maize | extracellular | 37.84 | 46.41 |
| KXG34187 | Sorghum | cytosol, mitochondrion, nucleus | 35.59 | 42.47 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G112020.2 | EnsemblPlantsGene:HORVU3Hr1G112020 | GO:GO:0006950 | GO:GO:0008150 | InterPro:ABA_WDS | PANTHER:PTHR33801 |
| PANTHER:PTHR33801:SF8 | PFAM:PF02496 | SEG:seg | UniParc:UPI000B46BB83 | UniProt:A0A287MQ90 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr3H:+:685309241..685310197
Molecular Weight (calculated)
23756.0 Da
IEP (calculated)
7.114
GRAVY (calculated)
-0.973
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAYYNGGRP MSYSNTEESF DGGRTVYSTT TKECYDAGKL GQGIGYGHGQ SHGNGGTNMY SNTSDVERFD SSMHGHGGGR TMYTTTTTDE CFDSARPGHG
101: YGVHGYGQND GRTMAYTTTT TESFGGGEQG QGYYKKEVTQ HKNRERIGEA GALAAGGFAL VNTPEAKKDP AYAGKHQIEA GLAGAAAVGA AGYTYHQHRE
201: QKQPGYGGKQ EYRMPVHNSY CN
101: YGVHGYGQND GRTMAYTTTT TESFGGGEQG QGYYKKEVTQ HKNRERIGEA GALAAGGFAL VNTPEAKKDP AYAGKHQIEA GLAGAAAVGA AGYTYHQHRE
201: QKQPGYGGKQ EYRMPVHNSY CN
001: MKDRENDGNL ESRIFVGGLS WDVTERQLES TFDRYGKITE CQIMVGRDTG RPRGFGFITF TDRRGADDAI KHMHGRELGN KVISVNKAEP KVGGEDVDQL
101: KKGGGYSSRG KGTEDECFKC RRPGHWARDC PSTGDDRERF RVPLAMRSRI GDIDGHRDRY GDRDLERERE REREFDRYMD GRRDRDGGRY SYRDRFDSGD
201: KYEPRDHYPF ERYAPPGDRF VSDRYGMPEH HLENEYRGRE RSYDRDRYAR DTSDRYGDMG PIRDEGRPYR SRPGPYDRPS RPGGRPSSYE RW
101: KKGGGYSSRG KGTEDECFKC RRPGHWARDC PSTGDDRERF RVPLAMRSRI GDIDGHRDRY GDRDLERERE REREFDRYMD GRRDRDGGRY SYRDRFDSGD
201: KYEPRDHYPF ERYAPPGDRF VSDRYGMPEH HLENEYRGRE RSYDRDRYAR DTSDRYGDMG PIRDEGRPYR SRPGPYDRPS RPGGRPSSYE RW
Arabidopsis Description
RZ1BGlycine-rich RNA-binding protein RZ1B [Source:UniProtKB/Swiss-Prot;Acc:O22703]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.