Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G517100.1 | Wheat | cytosol, mitochondrion, nucleus | 76.26 | 95.43 |
| TraesCS3B01G578200.1 | Wheat | cytosol | 95.43 | 92.07 |
| HORVU3Hr1G112010.1 | Barley | cytosol, nucleus, plastid | 92.24 | 80.8 |
| TraesCS3A01G510200.1 | Wheat | cytosol | 79.45 | 75.65 |
| TraesCS3A01G509900.1 | Wheat | cytosol | 73.52 | 73.85 |
| TraesCS3A01G509800.1 | Wheat | cytosol | 73.06 | 73.06 |
| TraesCS3A01G510000.1 | Wheat | cytosol | 52.97 | 72.05 |
| Os01t0963600-01 | Rice | extracellular | 44.75 | 53.85 |
| Zm00001d011813_P001 | Maize | extracellular | 42.92 | 51.93 |
| KXG34187 | Sorghum | cytosol, mitochondrion, nucleus | 41.55 | 48.92 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G510100.1 | EnsemblPlantsGene:TraesCS3A01G510100 | GO:GO:0006950 | GO:GO:0008150 | InterPro:ABA_WDS | PANTHER:PTHR33801 |
| PANTHER:PTHR33801:SF8 | PFAM:PF02496 | SEG:seg | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr3A:-:730279210..730279978
Molecular Weight (calculated)
23682.7 Da
IEP (calculated)
6.651
GRAVY (calculated)
-1.074
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAYYNGGRT MPYSNTDECF DGGRTMYSNN TDDCYDAGKH GHGHGQGHGH GGANMYANTT DVECFQDSGR HGYGGGGRTM YSNTVDEECF DSGRHGHGHG
101: HGYGHNDGRA MSYSTTTEEC FGGGEQGQGY YKKEVKQHKN RERVGEVGAL AAGAFALYEG YEVKKDPAHA RKHQIEAGVA GAAALGAGGY AYHEHREQKQ
201: AAYGGQQEYR MPVHNGYCN
101: HGYGHNDGRA MSYSTTTEEC FGGGEQGQGY YKKEVKQHKN RERVGEVGAL AAGAFALYEG YEVKKDPAHA RKHQIEAGVA GAAALGAGGY AYHEHREQKQ
201: AAYGGQQEYR MPVHNGYCN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.